GO_0003723 | OmnibusX

RNA binding

I. Involved cell-cell interactions

	Interactors	Protein name	Directionality	Classification
1	RNASET2-TLR8	RNT2_HUMAN - TLR8_HUMAN	Ligand-Receptor

II. Literature review

Name	RNA binding
ID	GO_0003723
collection_id	Molecular function
Alternative ID	GO:0000498, GO:0044822
Description	Binding to an RNA molecule or a portion thereof.
Related synonym	poly(A) RNA binding, poly(A)-RNA binding, poly-A RNA binding
External URL
Genes	MMTAG2 HNRNPCL3 PRRC2A PUF60 LARP4B SRSF4 DUSP11 RPL34 LUZP4 MRPL28 NME1 RBM23 FAM50A MRPS23 ISY1 STAU1 ARCN1 EDF1 PPP1R8 RTF1 NOP9 RPS8 RRP9 RBM47 LUC7L2 G3BP1 ku70_80_human EXOSC4 ZFP36 RBM42 DAZAP1 SPEN ACIN1 RBM19 LSM3 ERAL1 PHF6 THRAP3 MCAT CSNK1E SETX OTUD4 HMGB1 SUPT16H USO1 TFAM CFAP20 APOBEC3G EIF4E SNRPE RPF2 ALDOA RPS19 MARF1 MEX3B ASS1 FAM120A SMARCE1 GPATCH1 UBAP2L FSCN1 PELP1 NOL6 pspsc1_human CNBP RPS28 LSM1 RPS10 TPR ZNF239 NOP53 ZNF622 CACTIN HMGB3 RPL18A ZFP36L1 MYH9 STXBP1 DDX50 HNRNPLL ZC3H10 SNRPC PSMA6 TEFM ZNF385A EIF1B ZNF207 HSPA1A DRG2 APOBEC3C PUM1 SSRP1 HMGB2 EIF2S1 LSM6 DICER1 EYA1 RPL22 KPNA2 SUMO1 DHX37 PNO1 MTDH SPOUT1 ZC3H11A NABP1 DHX9 HLA-A TUFM SF3B5 ANKRD17 UBE2O LRP1 RPS9 PRPF40B MRPL11 RPUSD3 HSP90B1 CSDC2 KHDC4 REDIC1 PPAN ZFP36L2 RACK1 MRPL39 ZCRB1 NOP10 H1-3 EIF3H EIF3K BOP1 GEMIN5 ATP5F1C RPL38 ZC3H13 PPIE IFIH1 YBX1 TFB2M CCT3 YTHDF2 MATR3 TSR1 NOVA2 UTP15 NOL12 EIF5B SF3B1 SEC61B CHERP FRG1 PPIG IGF2BP2 RBM10 PDAP1 TOP1 PIN4 TNPO1 DDX39B sfpq_pspsc1_human RPF1 DDX18 BUD13 DDX5 NAT10 MKI67 tramp_human-1 THOC1 AKAP8L C11orf68 EIF1AX PARP1 SAFB2 CCAR2 RPL10A FARSB SARNP DNMT1 MPHOSPH10 TNS1 PSIP1 EIF1 MSI2 ADARB2 GTPBP10 GPKOW NDUFV3 MBNL3 MRPL20 LTA4H MTO1 HNRNPA0 TDRD3 sfpq_human-1 MRPL4 NVL nono_pspsc1_human CKAP4 A1CF HSD17B10 SPI1 FYTTD1 RBM3 COL14A1 RBM12 HSPA8 DMGDH CPSF4 SF3B6 FBRSL1 IREB2 HDAC2 APOBEC1 RBM7 UHMK1 ZNF768 DDX27 DDX1 POLR2B CCDC137 RBM8A UTP25 SNRNP70 BRIX1 TARBP1 DDX39A SFPQ CRKL SYNJ2 ZC3H7B SCAF1 HNRNPA2B1 ZC3H14 CPSF4L TARDBP PCDHGA9 DDX41 DHX57 ENOX1 RBM48 LRRC59 RRP7A NAA38 MRTO4 DIS3L THUMPD1 DHX8 TBRG4 EEF2 NELFB DARS1 RRS1 XRN1 NPM1 CELF6 FAM133B IFI16 NGRN RRP12 NMD3 TENT5A URB1 NOC2L CDC5L MRPL21 DHX38 APOBEC3D API5 RTCA DNTTIP2 PAX6 SMN1 PABPN1 TPD52L2 RPL21 NAP1L4 TRMT6 WDR6 TBL3 RBM33 SRSF11 LARP1 UBA1 RPS27 FLNB NSUN5P2 YY1 EIF5A2 FXR2 EIF2AK2 TUT7 KIN MRPL43 DAZ2 CFAP65 CELF1 DDX11L8 APOBEC3B RPL6 DIAPH1 RPL35 SETD1A RALYL SSBP1 FAM98A TIAL1 NXF3 SRRT ZYX C4BPA POLR2A CDC40 UPF1 APOBEC3H RBM45 LSM12 NR3C1 FCF1 WDR43 RPL11 RPL15 PLEC RPS5 WDR3 ZC3H6 G3BP2 RBM12B MRPS5 RPL13 ADK ATXN1L RBM14 SRP19 DNAJC21 MRPL44 EXOSC2 USP17L6P SRSF1 NOL3 PRPF38A RPS4Y1 DUS3L FDPS CS RPL32 USP10 ERH SCG3 MRPS28 NONO NR0B1 RPL27 CSTF2T SRP14 BRCA1 MRPL45 TRMT2A UTP14A ALDH6A1 TRIM21 CDKN2A RPL41 GIGYF2 WBP4 IMP3 GAR1 RBM5 ZNF638 STRBP STRAP DHX29 HNRNPF RBMS1 CSTF3 KRR1 EIF3B NOL11 ZNFX1 HABP4 H1-4 MECP2 O00370 DDX55 SYNE1 CWC15 RAN exosome-cytoplasmic2_human PUS7 DHX15 TENT5C CCDC86 DYNC1LI1 METTL16 GEMIN6 SRP68 CDKN2AIP PARN ZCCHC24 PCBP1 TDRD9 RPL7A TRIM56 IFIT1 exosome-dis3variant_human KTN1 RPL7L1 GNL2 sfpq_nono_human RPP25L MTCL1 RBM6 MFAP1 RPUSD1 RBMY1F PDCD4 MRPL54 RPL31 CIRBP rnase_mrp_human DDX17 RNMT PRPF3 PCID2 UBE2I DDX24 RCC1L ZFR DDX46 EIF5 FASTK PWP2 DIMT1 CSRP1 ASCC1 tramp_human CSTF1 NSUN7 KRT18 NCL PPP1CC PAPOLA ELAVL1 HADHB POP1 LSM14B CHD3 PEBP1 CORO1A CPEB3 BAG4 CASC3 NUFIP2 NUCKS1 CAVIN1 RTN4 HNRNPH1 TNRC6B ATP5F1A PUM2 RC3H1 RRP1 MBNL2 SNRPGP15 NPM3 SBDS UPF2 ZCCHC3 EIF5A YARS1 SRSF12 H1-2 RPGR S100A4 TIA1 SIN3A VCP RPS6 NLRP11 RBBP6 NXF5 RPS17 PUS7L MOV10L1 HNRNPCL2 RPLP0 PNN SETD1B NOM1 MRPL37 MRPL40 EIF3A BCLAF1 PRPF31 NOP16 FIP1L1 BCCIP SSB MIF4GD PTBP3 LSM7 NCBP2 UBFD1 HNRNPA1 ZC3H18 NUDT21 NBPF10 C14orf93 LUC7L3 NOA1 GPATCH8 TRMT10A NAA15 STIP1 GOT2 RSL1D1 TLR8 NXF2 PPIL4 PDCD11 MORC3 CANX EXD1 ALDH18A1 PRDM14 MANF HERC5 LSM2 ERVK-21 RCC2 MRPL24 PCBP2 XRCC5 HEATR1 RPL18 EIF3G GSPT1 RIDA NUSAP1 DUSP14 SF1 EIF5AL1 NAF1 TWF2 GRB7 RPS4X TRIM32 KCTD12 RPL24 RPL12 RPL23A EXOSC10 NSUN5 HNRNPM SARS2 LIN28A GPBP1 LLPH RPL36 ZMAT3 VSIG8 GTPBP4 H1-0 SF3A2 MAPT GSPT2 HNRNPUL1 CELF3 CDK11B PRPF8 ZNF74 SART3 PRRC2B TXN CNOT4 PRRC2C RBMY1C CSTF2 DHX32 CRNKL1 PA2G4 HSP90AA1 YWHAE MRPL32 SNHG28 SRSF7 SEC23IP UBC EXOSC1 ZCCHC17 UTP18 PTBP1 NELFCD RAD51AP1 MYO18A HOXB6 RPL17 MTERF1 NOP14 TFB1M GNL3 RBM25 RPS3A RPS27L SUGP2 SELENOH NSRP1 CAPRIN2 TSNAX MRPL9 TRUB2 APOBEC3F SLC25A5 nono_human-1 EIF4B RPS21 TRIP6 GTPBP1 GNL3L EXOSC7 LSM14A ABT1 RPS10P5 HARS1 DKC1 FBLL1 MRPL13 SRPK1 PAPOLB TOP3B SNRPD2 ATXN2L ELAC2 RAMAC NUP98 DHX35 SNIP1 PPP1R21 PRKDC BUD23 LAS1L EIF3D MTHFSD CNOT1 SPTBN1 HNRNPA3 WDR75 SNRPG MRPS11 THOC7 RPL37 WDR33 DDX42 PRPF38B SERPINH1 NUDT4B TPT1 HNRNPDL PHF5A TRAP1 PUS1 GLRX3 HSPD1 C1D MAK16 MRPL3 YBX3 MDH2 HEATR6 NOC4L LARP1B RPS14 SRP54 TNRC6A MRPS24 CNOT6 BICC1 PDIA4 IGF2BP1 KIF1C SAMD4A BZW1 CCDC47 AHNAK TRMT1L WDR36 RAVER1 ATXN2 SUMO2 HDLBP TSN SRSF2 SRP72 CTNNA1 DCD HTATSF1 POLR1G DAZL DZIP3 TBL2 MKRN2 ANP32A PPP5C EIF4G1 MEX3D LSM4 NCBP1 EXOSC6 NELFE THOC6 CPNE3 HELZ DDX10 PCSK9 DDX47 EIF3E MRPS21 RPUSD2 UCHL5 CCT6A UBTF KHDRBS1 POP7 UBE2L3 BYSL RBMY1E RPL14 TENT4B RBM28 HSP90AB1 TRIM25 MRPL42 ZNF346 exosome-cytoplasmic1_human DAP3 APEH MRPS14 TSFM XPO5 ESF1 STAU2 NOC3L MARK2 RPL19 IFIT2 UBAP2 CMSS1 NGDN SECISBP2 S100A16 MOV10 MEX3C LSM5 RBM4B HDGF LARP7 FLNA H4C1 RBM34 TRMT10C ADARB1 TMSB4X ILF3 R3HDM1 NOVA1 RPS12 LYAR PURB MPHOSPH6 RTCB MAP3K20 CEBPZ NOL7 MAGOH EEF1A1 GPATCH4 AHCYL1 DHX34 RBMY1A1 PRKRA DNAJC2 ENDOU CPSF6 JMJD6 SEC63 SNW1 EFTUD2 AGO3 PSMD4 SND1 EIF3C FASTKD3 ARHGEF28 ERVK-9 PCBP4 YTHDF1 RPL9 HMGN5 NOP56 RBFOX2 SRRM2 PRPF40A RPS19BP1 RDM1 UTP4 PFN1 TOP2A C7orf50 RPS15A SAMHD1 SRFBP1 ZC3H15 EXOSC9 KPNB1 PPIB MKRN1 MRPS26 OASL ERVK-8 ZC3HAV1 RBMXL1 AATF PTRH1 RO60 FUBP3 IFIT1B TRMT1 RBM15B MTPAP GDI2 ZBED4 GTF2F1 AGFG1 HUWE1 PRPF6 GFM1 CHTOP TAF15 HSPA1B MEPCE TDRKH CDK13 AICDA LIN28B RPS27A MTREX FXR1 AKAP1 DDX56 U2AF2 MAP4 FTSJ3 HARS2 ANXA7 METAP2 THUMPD2 SRSF8 WRAP53 YLPM1 EIF3I IFIT5 DDX19B KHDC1 COA6 MRPL22 RANGAP1 ACTN4 RBMY1D EIF3L TRNAU1AP CNP QKI SLC3A2 HERVK_113 RPS15 NOL4 DHX36 TBCA FASTKD2 RPS2 TRA2A CISD2 EPPK1 SERBP1 PNISR IMMT MAPRE1 MKRN3 ESRP2 SNRPA1 SRSF9 HNRNPR IMPDH1 CNOT7 ZC3H8 DDX23 PABPC4 ILF2 NKAP NAP1L1 HLTF CDH2 TES EIF3CL RPL10 MRPL14 NANOS3 IGHMBP2 DQX1 LBR UBE2N POLDIP3 NSUN2 exosome-nucleolar_human GRWD1 SNRNP200 POU5F1 ADD1 RPS11 RRBP1 RNASEL SNRNP40 AGO2 MRPS30 SKIC2 IBA57 PURG UPF3B TCOF1 NXF1 EIF1AD DDX31 EIF4G2 RAE1 CPEB4 PTBP2 UTP11 DIS3 HNRNPCL4 DHX16 TCP1 RPL29 YWHAG ELAPOR1 DDX51 RTRAF SNU13 FNDC3B DDX6 ENOX2 AKAP17A RPS4Y2 MTIF2 GPBP1L1 NHP2 DSP P4HB SRSF10 SREK1 SYNJ1 TRDMT1 EMG1 ROCK2 PABPC1 NIFK SNRPA MACF1 PURA C1orf131 ERVK-25 RAMACL HSPA9 RPL27A CPSF7 SMG1 DDX49 REXO4 RBM17 ISG20L2 CPEB2 MYBBP1A PRR3 SYF2 DBR1 DHX40 MRPL10 FMR1 CHCHD1 EIF4A3 PEF1 AQR REPIN1 FAU CLTC RPL22L1 CLK3 SART1 RBM39 ZCCHC7 TDRD10 MRM1 MRPS15 EIF4A2 ARL6IP4 UTP20 SLTM RBMY1B DDX3X SRPRA CAST DHX33 USP36 SLIRP BAZ2A TRA2B KHDC3L NCBP3 DCAF13 paxt_human-1 RBM26 SLC25A11 RPL26L1 CCDC124 NQO1 RPL36A CHD2 LRRC47 SLBP DIDO1 RPSA HERV-K104 SUB1 JAKMIP1 RAVER2 RPS3 PNLDC1 RC3H2 RPL7 HNRNPC PSPC1 RBM18 HNRNPL ARF1 RBMX2 RBPMS NSA2 PPIA EIF4H PPRC1 MRPS7 TNRC6C ANXA11 HMGA1 MRPS31 RPS13 NOL9 FLYWCH2 PNPT1 CALR RPS7 SRSF3 HELZ2 XRN2 DNAJC17 PPARGC1A EIF4A1 U2SURP HNRNPAB MRPL1 MRPL23 DNM1 CASP7 MAZ RPUSD4 LGALS1 DYNC1H1 paxt_human DDX21 SCAF4 RPN1 IMPDH2 RBM22 RPL23 SF3A1 NFX1 NPM2 SORBS2 WDR46 RPS16 PTCD1 DROSHA SRPK2 YBX2 RIMS1 RP9 ELAVL2 RPS23 UBR5 SRP9 SPATS2 UTP23 SAMD4B CCDC9 NUP42 TIMM50 APOBEC2 KHDC1L GANAB MYO5A SNRPB PDIA3 SCAF8 RBM20 MCTS1 PRDX1 PRMT1 RPS18 DCN ZCCHC8 RBMX USP17L24 FNDC3A GTF2E2 EIF2D ALKBH5 HSPB1 PTPN1 TUT4 KHSRP SHFL PUSL1 RPS25 ACO1 SRSF6 DDX52 CTIF IGF2BP3 RPP30 TUT1 RPL4 GRN PSMC1 HMGN2 IPO5 ZNF598 FAM120C CCDC9B AKAP8 MYEF2 MRPL12 TERT SLC16A3 MRPL15 EWSR1 RNPS1 LSM8 EIF4E2 ZC3H4 SNTB2 ERVK-16 REXO5 YWHAZ SRRM1 RBM43 HBP1 RPL28 SON SAMSN1 PATL2 ZNF106 SUPT6H MRPL41 CELF2 SNRPD1 DDX43 CCAR1 TFRC EZR MTRES1 SECISBP2L RPL39 NOSIP EIF4ENIF1 UNK SRSF5 RSRC2 RRP1B NOLC1 TCF20 RPL35A SF3B4 APEX1 ASCC3 DDX12P TRIM28 U2AF1 H1-5 APOBEC3A NUDT16L1 PPP1R10 PHAX RBM38 RNASEH2A FUS DUT RPS24 SFSWAP VIRMA RPL37A ALYREF EIF4G3 FASTKD1 SMARCA4 MRPS12 XRCC6 NUFIP1 SPATS2L LGALS3 RARS2 MRPS9 RRP8 TEP1 EXOSC3 RDX RNASET2 C2orf15 PATL1 WBP11 MRPL27 NIP7 TCERG1 FBL UNC50 R3HDM2 exosome-nuclear_human CWC22 CCDC59 ARHGEF1 SCAF11 SUCLG1 FAM32A SAFB RPP25 ERI3 GRB2 NOP58 YTHDF3 RPL8 ETF1 SUGP1 YARS2 NOL10 SF3B2 SMG6 baz2a-smca5_human NOP2 OOEP BMS1 RBMS2 FASN SNRPN KMT2C CDC42EP4 RPL30 PUM3 BARD1 PKN2 ZCCHC9 XPO1 PUS3 SNRPD3 MCTS2 MSI1 MBNL1 SUPT5H PCBP3 JUN LARP4 KNOP1 KRI1 NSUN5P1 AGO1 HNRNPH2 GRSF1 CPSF2 HSPE1 SAP18 HNRNPUL2 MAGOHB NCOA5 HNRNPD ZC3H7A ADAR PAPOLG FARSA NOL8 RPS26 NTPCR PES1 BTF3 XIRP1 MRPS35 HNRNPU MEX3A RBM27 DDX54 RCAN3 POLRMT EXOSC5 ERVK-6 WT1 FASTKD5 SMNDC1 PTCD3 YTHDC1 ZC3H12A THOC3 DEK ANKHD1 ACAA2 CCT4 ANXA2 MRPL2 ZBP1 CSTB PRP4K GOLGB1 HNRNPK PPHLN1 trna-ligase_human KYAT3 nelf_human CAPRIN1 ERVK-19 YTHDC2 ZNF579 H1-10 RPS20 SYNCRIP HNRNPH3 HENMT1 TRIR TASOR RPL3L RNASEH1 PCDH20 ZNF326 RBBP7 ENO1 CPSF3 PKM FKBP4 RBFOX1 GCN1 SUPV3L1 RRP36 PYM1 EBNA1BP2 PPARGC1B MRM3 SMC1A RALY ABCF1 RBM4 DDX28 CSDE1 RPL26 RANBP2 BST2 C1orf52 FKBP3 RPL5 FUBP1 HNRNPCL1 SURF6 RBM15 RADX RPL3 ZRANB2 PTCD2 GEMIN7 DNA2 FAM98B KHDRBS3 SNRPF NKRF LRPPRC CLNS1A rixosome_human DHX30 RPL13A UTP3 PEG10 PARP12 ADAT1 EIF2S2 SF3A3 CNOT8 PAIP1