Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 20% ± 3% | |
GABAergic neuron | 3 studies | 28% ± 8% | |
glutamatergic neuron | 3 studies | 32% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1103.44 | 1445 / 1445 | 100% | 12.21 | 183 / 183 |
intestine | 100% | 1248.07 | 966 / 966 | 100% | 13.09 | 527 / 527 |
breast | 100% | 1471.29 | 459 / 459 | 100% | 13.83 | 1116 / 1118 |
stomach | 100% | 967.13 | 359 / 359 | 100% | 11.97 | 285 / 286 |
lung | 99% | 1109.77 | 575 / 578 | 100% | 13.48 | 1155 / 1155 |
bladder | 100% | 1352.62 | 21 / 21 | 99% | 13.85 | 501 / 504 |
prostate | 100% | 1461.58 | 245 / 245 | 99% | 11.06 | 499 / 502 |
brain | 99% | 946.27 | 2627 / 2642 | 100% | 12.70 | 703 / 705 |
uterus | 100% | 1555.41 | 170 / 170 | 99% | 15.16 | 453 / 459 |
pancreas | 100% | 1091.33 | 328 / 328 | 98% | 9.91 | 175 / 178 |
skin | 100% | 1640.71 | 1809 / 1809 | 98% | 16.50 | 464 / 472 |
thymus | 100% | 1258.89 | 653 / 653 | 97% | 9.23 | 588 / 605 |
ovary | 100% | 1558.63 | 180 / 180 | 97% | 9.65 | 415 / 430 |
adrenal gland | 100% | 1185.52 | 258 / 258 | 96% | 8.71 | 220 / 230 |
kidney | 100% | 910.11 | 89 / 89 | 96% | 8.62 | 861 / 901 |
liver | 100% | 899.98 | 226 / 226 | 87% | 6.63 | 353 / 406 |
adipose | 100% | 1398.40 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 961.00 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.20 | 29 / 29 |
spleen | 100% | 1740.97 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.54 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.50 | 1 / 1 |
heart | 98% | 541.42 | 841 / 861 | 0% | 0 | 0 / 0 |
muscle | 97% | 482.40 | 778 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 86% | 10.42 | 69 / 80 |
peripheral blood | 78% | 719.20 | 720 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
GO_0003724 | Molecular function | RNA helicase activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | DDX55 |
Protein name | ATP-dependent RNA helicase DDX55 (EC 3.6.4.13) (DEAD box protein 55) ATP-dependent RNA helicase (EC 3.6.4.13) DEAD-box helicase 55 |
Synonyms | KIAA1595 |
Description | FUNCTION: Probable ATP-binding RNA helicase. FUNCTION: RNA helicase. . FUNCTION: RNA helicase. . |
Accessions | ENST00000544738.5 ENST00000538744.5 ENST00000238146.9 [Q8NHQ9-1] F5H2I2 ENST00000540763.5 F5H5U2 F5H735 E7EX41 ENST00000421670.3 [Q8NHQ9-2] ENST00000354291.8 Q8NHQ9 |