I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 3 studies | 24% ± 3% | |
| GABAergic neuron | 3 studies | 23% ± 4% | |
| glutamatergic neuron | 3 studies | 29% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 3 studies | 24% ± 3% | |
| GABAergic neuron | 3 studies | 23% ± 4% | |
| glutamatergic neuron | 3 studies | 29% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| ovary | 100% | 1360.21 | 180 / 180 | 100% | 12.40 | 430 / 430 |
| breast | 100% | 1838.08 | 459 / 459 | 100% | 18.78 | 1114 / 1118 |
| esophagus | 100% | 1432.48 | 1444 / 1445 | 99% | 14.56 | 182 / 183 |
| skin | 100% | 2492.21 | 1809 / 1809 | 99% | 26.44 | 468 / 472 |
| intestine | 100% | 1164.80 | 963 / 966 | 99% | 14.85 | 522 / 527 |
| bladder | 100% | 1580.95 | 21 / 21 | 99% | 14.27 | 497 / 504 |
| prostate | 100% | 1037.39 | 245 / 245 | 98% | 12.88 | 494 / 502 |
| stomach | 100% | 1304.09 | 358 / 359 | 98% | 14.08 | 281 / 286 |
| uterus | 100% | 1460.49 | 170 / 170 | 98% | 14.41 | 449 / 459 |
| brain | 98% | 839.92 | 2579 / 2642 | 100% | 13.54 | 705 / 705 |
| thymus | 100% | 1239.34 | 652 / 653 | 98% | 9.12 | 591 / 605 |
| lung | 97% | 1155.42 | 563 / 578 | 99% | 14.83 | 1149 / 1155 |
| pancreas | 99% | 1101.65 | 325 / 328 | 98% | 10.72 | 174 / 178 |
| kidney | 99% | 802.74 | 88 / 89 | 91% | 8.44 | 820 / 901 |
| liver | 100% | 1034.54 | 226 / 226 | 86% | 7.60 | 350 / 406 |
| adrenal gland | 100% | 1951.59 | 258 / 258 | 83% | 6.20 | 190 / 230 |
| adipose | 100% | 1949.02 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 12.77 | 29 / 29 |
| muscle | 100% | 1923.39 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1365.02 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 4.35 | 1 / 1 |
| blood vessel | 100% | 1304.16 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 14.05 | 44 / 45 |
| eye | 0% | 0 | 0 / 0 | 94% | 9.59 | 75 / 80 |
| heart | 92% | 867.49 | 794 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 50% | 1194.30 | 468 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0030490 | Biological process | maturation of SSU-rRNA |
| GO_0042274 | Biological process | ribosomal small subunit biogenesis |
| GO_0005730 | Cellular component | nucleolus |
| GO_0034388 | Cellular component | Pwp2p-containing subcomplex of 90S preribosome |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0031965 | Cellular component | nuclear membrane |
| GO_0032040 | Cellular component | small-subunit processome |
| GO_0030515 | Molecular function | snoRNA binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | WDR3 |
| Protein name | WD repeat domain 3, isoform CRA_b (cDNA FLJ77605, highly similar to Homo sapiens WD repeat domain 3 (WDR3), mRNA) WD repeat-containing protein 3 WD repeat domain 3 (WDR3 protein) |
| Synonyms | hCG_37073 |
| Description | FUNCTION: Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome. . |
| Accessions | Q5TDG3 Q9UNX4 ENST00000369441.7 Q6PDA5 ENST00000349139.6 |
