RPS16 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	50 studies	90% ± 18%	Explore
macrophage	45 studies	76% ± 26%	Explore
natural killer cell	43 studies	86% ± 17%	Explore
endothelial cell	43 studies	72% ± 28%	Explore
fibroblast	41 studies	79% ± 27%	Explore
T cell	40 studies	80% ± 24%	Explore
CD8-positive, alpha-beta T cell	39 studies	86% ± 18%	Explore
pericyte	36 studies	78% ± 28%	Explore
CD4-positive, alpha-beta T cell	36 studies	90% ± 16%	Explore
plasmacytoid dendritic cell	31 studies	92% ± 9%	Explore
conventional dendritic cell	30 studies	95% ± 6%	Explore
dendritic cell	28 studies	87% ± 17%	Explore
smooth muscle cell	28 studies	82% ± 25%	Explore
plasma cell	27 studies	83% ± 23%	Explore
classical monocyte	26 studies	88% ± 13%	Explore
regulatory T cell	26 studies	93% ± 11%	Explore
monocyte	25 studies	80% ± 20%	Explore
endothelial cell of lymphatic vessel	25 studies	80% ± 23%	Explore
epithelial cell	25 studies	81% ± 25%	Explore
mature NK T cell	24 studies	83% ± 20%	Explore
non-classical monocyte	24 studies	91% ± 14%	Explore
mast cell	22 studies	74% ± 22%	Explore
gamma-delta T cell	21 studies	90% ± 12%	Explore
memory B cell	21 studies	97% ± 5%	Explore
basal cell	21 studies	87% ± 15%	Explore
connective tissue cell	20 studies	85% ± 23%	Explore
naive B cell	18 studies	95% ± 8%	Explore
ciliated cell	17 studies	77% ± 20%	Explore
mucosal invariant T cell	17 studies	91% ± 12%	Explore
capillary endothelial cell	17 studies	63% ± 24%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	94% ± 12%	Explore
endothelial cell of artery	16 studies	73% ± 21%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	86% ± 17%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	87% ± 12%	Explore
vein endothelial cell	15 studies	75% ± 23%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	97% ± 5%	Explore
myofibroblast cell	14 studies	88% ± 20%	Explore
myeloid cell	14 studies	83% ± 22%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	90% ± 14%	Explore
neutrophil	13 studies	59% ± 26%	Explore
mesothelial cell	13 studies	76% ± 27%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	85% ± 21%	Explore
innate lymphoid cell	12 studies	90% ± 11%	Explore
plasmablast	12 studies	93% ± 6%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	90% ± 12%	Explore
secretory cell	12 studies	89% ± 14%	Explore
goblet cell	12 studies	72% ± 23%	Explore
endothelial cell of vascular tree	12 studies	83% ± 26%	Explore
leukocyte	11 studies	79% ± 24%	Explore
microglial cell	11 studies	59% ± 28%	Explore
T follicular helper cell	10 studies	96% ± 3%	Explore
progenitor cell	10 studies	90% ± 15%	Explore
IgG plasma cell	10 studies	79% ± 20%	Explore
erythrocyte	10 studies	67% ± 25%	Explore
type I pneumocyte	9 studies	73% ± 22%	Explore
type II pneumocyte	9 studies	83% ± 22%	Explore
club cell	9 studies	76% ± 28%	Explore
astrocyte	9 studies	43% ± 19%	Explore
IgA plasma cell	9 studies	75% ± 24%	Explore
hematopoietic stem cell	9 studies	89% ± 24%	Explore
platelet	8 studies	49% ± 27%	Explore
abnormal cell	8 studies	77% ± 27%	Explore
neuron	8 studies	66% ± 23%	Explore
enterocyte	8 studies	68% ± 23%	Explore
respiratory goblet cell	7 studies	77% ± 15%	Explore
mononuclear phagocyte	7 studies	84% ± 22%	Explore
epithelial cell of proximal tubule	7 studies	77% ± 20%	Explore
transit amplifying cell	7 studies	74% ± 27%	Explore
retinal rod cell	7 studies	56% ± 23%	Explore
alveolar macrophage	6 studies	83% ± 24%	Explore
ionocyte	6 studies	76% ± 13%	Explore
kidney loop of Henle epithelial cell	6 studies	75% ± 13%	Explore
renal alpha-intercalated cell	6 studies	94% ± 5%	Explore
oligodendrocyte	6 studies	29% ± 9%	Explore
enteroendocrine cell	6 studies	78% ± 28%	Explore
erythroblast	6 studies	76% ± 21%	Explore
amacrine cell	6 studies	46% ± 19%	Explore
retinal ganglion cell	6 studies	59% ± 22%	Explore
precursor B cell	6 studies	96% ± 4%	Explore
brush cell	6 studies	78% ± 19%	Explore
glial cell	6 studies	61% ± 28%	Explore
immature B cell	6 studies	97% ± 2%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	97% ± 5%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	92% ± 14%	Explore
CD4-positive helper T cell	5 studies	92% ± 6%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	93% ± 10%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	86% ± 11%	Explore
hematopoietic precursor cell	5 studies	90% ± 11%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	87% ± 11%	Explore
megakaryocyte	5 studies	72% ± 19%	Explore
intestinal crypt stem cell	5 studies	83% ± 30%	Explore
OFF-bipolar cell	5 studies	62% ± 21%	Explore
ON-bipolar cell	5 studies	59% ± 22%	Explore
retinal cone cell	5 studies	65% ± 24%	Explore
lymphocyte	5 studies	82% ± 28%	Explore
T-helper 17 cell	5 studies	98% ± 2%	Explore
group 3 innate lymphoid cell	5 studies	96% ± 2%	Explore
Mueller cell	5 studies	64% ± 17%	Explore
double negative thymocyte	5 studies	96% ± 3%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	95% ± 8%	Explore
granulocyte	5 studies	90% ± 8%	Explore
intermediate monocyte	5 studies	87% ± 12%	Explore
oligodendrocyte precursor cell	5 studies	42% ± 30%	Explore
melanocyte	5 studies	68% ± 29%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	76% ± 23%	Explore
deuterosomal cell	4 studies	79% ± 18%	Explore
duct epithelial cell	4 studies	93% ± 5%	Explore
exhausted T cell	4 studies	92% ± 7%	Explore
precursor cell	4 studies	83% ± 24%	Explore
pancreatic A cell	4 studies	90% ± 15%	Explore
type B pancreatic cell	4 studies	89% ± 14%	Explore
endothelial cell of sinusoid	4 studies	47% ± 29%	Explore
glomerular endothelial cell	4 studies	73% ± 16%	Explore
kidney connecting tubule epithelial cell	4 studies	81% ± 13%	Explore
podocyte	4 studies	83% ± 16%	Explore
GABAergic amacrine cell	4 studies	43% ± 11%	Explore
glycinergic amacrine cell	4 studies	43% ± 12%	Explore
pro-B cell	4 studies	96% ± 2%	Explore
neuroendocrine cell	4 studies	90% ± 6%	Explore
adventitial cell	4 studies	86% ± 15%	Explore
mucus secreting cell	4 studies	78% ± 31%	Explore
retina horizontal cell	4 studies	54% ± 15%	Explore
inflammatory macrophage	4 studies	79% ± 15%	Explore
acinar cell	4 studies	87% ± 12%	Explore
muscle cell	4 studies	55% ± 20%	Explore
germinal center B cell	4 studies	97% ± 2%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	94% ± 6%	Explore
hepatocyte	4 studies	62% ± 32%	Explore
IgM plasma cell	4 studies	83% ± 19%	Explore
GABAergic neuron	4 studies	30% ± 6%	Explore
interneuron	4 studies	48% ± 26%	Explore
T-helper 1 cell	4 studies	99% ± 1%	Explore
squamous epithelial cell	3 studies	72% ± 13%	Explore
pancreatic D cell	3 studies	96% ± 4%	Explore
renal beta-intercalated cell	3 studies	98% ± 1%	Explore
neural crest cell	3 studies	99% ± 0%	Explore
paneth cell	3 studies	89% ± 9%	Explore
retinal bipolar neuron	3 studies	56% ± 26%	Explore
renal principal cell	3 studies	73% ± 11%	Explore
thymocyte	3 studies	100% ± 0%	Explore
extravillous trophoblast	3 studies	100% ± 0%	Explore
placental villous trophoblast	3 studies	100% ± 0%	Explore
Schwann cell	3 studies	69% ± 36%	Explore
serous secreting cell	3 studies	86% ± 9%	Explore
tissue-resident macrophage	3 studies	73% ± 29%	Explore
follicular B cell	3 studies	96% ± 3%	Explore
intraepithelial lymphocyte	3 studies	95% ± 2%	Explore
rod bipolar cell	3 studies	71% ± 9%	Explore
myoepithelial cell	3 studies	97% ± 2%	Explore
cholangiocyte	3 studies	50% ± 34%	Explore
luminal cell of prostate epithelium	3 studies	100% ± 0%	Explore
retinal pigment epithelial cell	3 studies	41% ± 17%	Explore
glutamatergic neuron	3 studies	40% ± 2%	Explore
pancreatic ductal cell	3 studies	93% ± 6%	Explore
granulocyte monocyte progenitor cell	3 studies	75% ± 31%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	100% ± 0%	Explore
keratinocyte	3 studies	95% ± 5%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	97% ± 2%	Explore
double-positive, alpha-beta thymocyte	3 studies	98% ± 1%	Explore
progenitor cell of mammary luminal epithelium	3 studies	96% ± 4%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	19 studies	79% ± 21%	Explore
peripheral blood	19 studies	90% ± 11%	Explore
intestine	13 studies	83% ± 18%	Explore
brain	11 studies	38% ± 21%	Explore
eye	10 studies	60% ± 20%	Explore
kidney	8 studies	77% ± 21%	Explore
liver	7 studies	64% ± 26%	Explore
bone marrow	6 studies	87% ± 12%	Explore
pancreas	5 studies	84% ± 17%	Explore
uterus	5 studies	91% ± 14%	Explore
lymph node	4 studies	97% ± 3%	Explore
placenta	4 studies	86% ± 23%	Explore
heart	4 studies	40% ± 20%	Explore
adipose	4 studies	41% ± 30%	Explore
esophagus	4 studies	71% ± 24%	Explore
prostate	4 studies	88% ± 21%	Explore
breast	4 studies	92% ± 4%	Explore
skin	3 studies	81% ± 19%	Explore
stomach	3 studies	58% ± 25%	Explore
thymus	3 studies	79% ± 28%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	33355.44	1445 / 1445	100%	637.70	183 / 183
liver	100%	15385.98	226 / 226	100%	733.63	406 / 406
ovary	100%	73130.43	180 / 180	100%	1733.44	430 / 430
skin	100%	42411.93	1809 / 1809	100%	1029.55	472 / 472
uterus	100%	41890.43	170 / 170	100%	1203.25	458 / 459
thymus	100%	26564.81	652 / 653	100%	910.91	604 / 605
pancreas	100%	30204.42	328 / 328	99%	934.29	177 / 178
intestine	100%	34693.57	966 / 966	99%	1229.71	523 / 527
prostate	100%	31084.72	245 / 245	99%	1102.58	498 / 502
stomach	100%	27977.99	359 / 359	99%	1033.60	282 / 286
kidney	100%	23486.52	89 / 89	99%	663.45	888 / 901
breast	100%	37927.36	459 / 459	98%	767.00	1100 / 1118
lung	100%	28672.98	576 / 578	99%	1003.12	1140 / 1155
adrenal gland	100%	22931.06	258 / 258	98%	585.21	226 / 230
bladder	100%	35704.86	21 / 21	98%	1116.25	493 / 504
brain	98%	11702.35	2597 / 2642	99%	603.26	698 / 705
adipose	100%	36024.12	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	1802.89	80 / 80
lymph node	0%	0	0 / 0	100%	2157.66	29 / 29
spleen	100%	34627.80	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	857.40	45 / 45
ureter	0%	0	0 / 0	100%	785.01	1 / 1
blood vessel	100%	30754.37	1334 / 1335	0%	0	0 / 0
muscle	100%	29485.87	802 / 803	0%	0	0 / 0
heart	98%	20638.77	846 / 861	0%	0	0 / 0
peripheral blood	96%	28500.29	895 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006412	Biological process	translation
GO_1990830	Biological process	cellular response to leukemia inhibitory factor
GO_0042274	Biological process	ribosomal small subunit biogenesis
GO_0000462	Biological process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO_0006364	Biological process	rRNA processing
GO_0002181	Biological process	cytoplasmic translation
GO_0005730	Cellular component	nucleolus
GO_0022626	Cellular component	cytosolic ribosome
GO_0022627	Cellular component	cytosolic small ribosomal subunit
GO_0016020	Cellular component	membrane
GO_0032040	Cellular component	small-subunit processome
GO_0070062	Cellular component	extracellular exosome
GO_0005654	Cellular component	nucleoplasm
GO_0005925	Cellular component	focal adhesion
GO_0005829	Cellular component	cytosol
GO_0045202	Cellular component	synapse
GO_0015935	Cellular component	small ribosomal subunit
GO_0005737	Cellular component	cytoplasm
GO_0003735	Molecular function	structural constituent of ribosome
GO_0003723	Molecular function	RNA binding
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	RPS16
Protein name	40S ribosomal protein S16 Small ribosomal subunit protein uS9 (40S ribosomal protein S16)
Synonyms	hCG_43353
Description	FUNCTION: Component of the small ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome . .
Accessions	ENST00000602153.5 M0R1M5 ENST00000599539.5 ENST00000599705.1 M0R3H0 Q6IPX4 M0QX76 M0R210 ENST00000601655.5 ENST00000251453.8 ENST00000339471.8 P62249

RPS16 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review