hematopoietic stem cell report

I. Related cell sub types

II. Gene markers

Gene
Number of
supported studies
Average coverage
Other major groups
(express this gene)
Other cell types
(express this gene)
PRSS57765% ± 24%05
HEMGN426% ± 6%02
AVP323% ± 8%00
TRIM58336% ± 28%03
GATA1320% ± 5%04
SPINK2866% ± 9%13
CRHBP639% ± 10%13
FAM30A647% ± 7%16
NFE2640% ± 14%110
MMRN1429% ± 8%16
FAM117A441% ± 22%16
IGLL1329% ± 10%15
FCER1A324% ± 3%18
MYCT1317% ± 3%18
EREG632% ± 11%211
SLC39A3425% ± 10%27
REC8322% ± 0%24
FLT3336% ± 14%24
CYTL1737% ± 11%37
GNA15639% ± 13%316
RAB37631% ± 10%318
ANGPT1533% ± 21%39
IL18630% ± 7%320
TESPA1527% ± 8%313
CSF3R540% ± 13%315
SPN845% ± 15%345
NPR3447% ± 16%38
SMIM24849% ± 10%414
CD34747% ± 16%413
SMIM3730% ± 12%415

III. Associated gene sets

GO_0035024Biological processnegative regulation of Rho protein signal transduction
GO_0033631Biological processcell-cell adhesion mediated by integrin
GO_0015986Biological processproton motive force-driven ATP synthesis
GO_1902255Biological processpositive regulation of intrinsic apoptotic signaling pathway by p53 class mediator
GO_0032286Biological processcentral nervous system myelin maintenance
GO_0051583Biological processdopamine uptake involved in synaptic transmission
GO_0031118Biological processrRNA pseudouridine synthesis
GO_0060385Biological processaxonogenesis involved in innervation
GO_0001562Biological processresponse to protozoan
GO_0097294Biological process'de novo' XMP biosynthetic process
GO_0050904Biological processdiapedesis
GO_1904851Biological processpositive regulation of establishment of protein localization to telomere
GO_0014854Biological processresponse to inactivity
GO_0031145Biological processanaphase-promoting complex-dependent catabolic process
GO_0006177Biological processGMP biosynthetic process
GO_0045656Biological processnegative regulation of monocyte differentiation
GO_0090666Biological processscaRNA localization to Cajal body
GO_0030174Biological processregulation of DNA-templated DNA replication initiation
GO_0009642Biological processresponse to light intensity
GO_0070495Biological processnegative regulation of thrombin-activated receptor signaling pathway
GO_0039529Biological processRIG-I signaling pathway
GO_0006231Biological processdTMP biosynthetic process
GO_0042775Biological processmitochondrial ATP synthesis coupled electron transport
GO_0045906Biological processnegative regulation of vasoconstriction
GO_0006164Biological processpurine nucleotide biosynthetic process
GO_0000460Biological processmaturation of 5.8S rRNA
GO_0022898Biological processregulation of transmembrane transporter activity
GO_0120317Biological processsperm mitochondrial sheath assembly
GO_0031120Biological processsnRNA pseudouridine synthesis
GO_0045910Biological processnegative regulation of DNA recombination

IV. Literature review

[source]
Cell type namehematopoietic stem cell
Synonymsblood forming stem cell
hemopoietic stem cell
DescriptionA stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. Hematopoietic stem cells lack cell markers of effector cells (lin-negative). Lin-negative is defined by lacking one or more of the following cell surface markers: CD2, CD3 epsilon, CD4, CD5 ,CD8 alpha chain, CD11b, CD14, CD19, CD20, CD56, ly6G, ter119.
ParentCL_0000723