Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 18 studies | 23% ± 6% | |
pericyte | 18 studies | 27% ± 10% | |
plasmacytoid dendritic cell | 13 studies | 33% ± 12% | |
mast cell | 12 studies | 24% ± 7% | |
adipocyte | 9 studies | 25% ± 6% | |
smooth muscle cell | 8 studies | 24% ± 7% | |
endothelial cell | 8 studies | 22% ± 6% | |
platelet | 7 studies | 34% ± 13% | |
hematopoietic stem cell | 7 studies | 30% ± 12% | |
classical monocyte | 5 studies | 22% ± 4% | |
pro-B cell | 5 studies | 38% ± 9% | |
myofibroblast cell | 4 studies | 28% ± 5% | |
megakaryocyte | 3 studies | 32% ± 17% | |
myeloid cell | 3 studies | 23% ± 4% | |
granulocyte | 3 studies | 22% ± 7% | |
connective tissue cell | 3 studies | 17% ± 2% |
Insufficient scRNA-seq data for expression of SMIM3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 3152.51 | 245 / 245 | 99% | 27.70 | 497 / 502 |
intestine | 100% | 2638.24 | 962 / 966 | 98% | 47.11 | 517 / 527 |
thymus | 99% | 2468.23 | 649 / 653 | 98% | 41.76 | 590 / 605 |
breast | 100% | 7728.80 | 459 / 459 | 96% | 32.45 | 1076 / 1118 |
lung | 100% | 3415.10 | 576 / 578 | 97% | 35.50 | 1115 / 1155 |
pancreas | 98% | 1762.52 | 321 / 328 | 96% | 65.89 | 171 / 178 |
ovary | 100% | 2649.77 | 180 / 180 | 93% | 26.73 | 400 / 430 |
esophagus | 98% | 2139.31 | 1409 / 1445 | 92% | 26.23 | 169 / 183 |
uterus | 98% | 2218.48 | 166 / 170 | 92% | 38.40 | 423 / 459 |
bladder | 100% | 2437.29 | 21 / 21 | 88% | 31.04 | 444 / 504 |
kidney | 98% | 2765.03 | 87 / 89 | 89% | 68.61 | 804 / 901 |
adrenal gland | 100% | 2382.35 | 258 / 258 | 86% | 66.78 | 197 / 230 |
stomach | 92% | 1944.63 | 329 / 359 | 92% | 31.87 | 263 / 286 |
skin | 82% | 2180.75 | 1477 / 1809 | 81% | 38.00 | 380 / 472 |
brain | 66% | 660.33 | 1735 / 2642 | 96% | 49.89 | 677 / 705 |
adipose | 100% | 9689.08 | 1204 / 1204 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.94 | 1 / 1 |
blood vessel | 100% | 3867.23 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 2408.94 | 856 / 861 | 0% | 0 | 0 / 0 |
spleen | 98% | 2771.16 | 236 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 32.69 | 44 / 45 |
peripheral blood | 82% | 1428.86 | 759 / 929 | 0% | 0 | 0 / 0 |
muscle | 73% | 836.90 | 583 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 69% | 14.13 | 20 / 29 |
liver | 18% | 184.86 | 41 / 226 | 32% | 7.83 | 130 / 406 |
eye | 0% | 0 | 0 / 0 | 4% | 0.42 | 3 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
GO_0042802 | Molecular function | identical protein binding |
Gene name | SMIM3 |
Protein name | Small integral membrane protein 3 (NGF-induced differentiation clone 67 protein) (Small membrane protein NID67) |
Synonyms | C5orf62 NID67 |
Description | |
Accessions | Q9BZL3 ENST00000648745.1 ENST00000526627.2 |