Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 22% ± 4% | |
fibroblast | 7 studies | 20% ± 4% | |
ciliated cell | 6 studies | 25% ± 8% | |
plasmacytoid dendritic cell | 6 studies | 23% ± 9% | |
natural killer cell | 5 studies | 19% ± 3% | |
goblet cell | 5 studies | 31% ± 6% | |
plasma cell | 4 studies | 23% ± 13% | |
classical monocyte | 4 studies | 24% ± 2% | |
epithelial cell | 4 studies | 43% ± 16% | |
basal cell | 4 studies | 22% ± 6% | |
macrophage | 4 studies | 19% ± 4% | |
dendritic cell | 4 studies | 26% ± 8% | |
mucosal invariant T cell | 4 studies | 18% ± 3% | |
type B pancreatic cell | 3 studies | 48% ± 27% | |
conventional dendritic cell | 3 studies | 23% ± 9% | |
myeloid cell | 3 studies | 25% ± 7% | |
secretory cell | 3 studies | 22% ± 5% | |
regulatory T cell | 3 studies | 16% ± 0% | |
CD8-positive, alpha-beta T cell | 3 studies | 16% ± 0% | |
pancreatic A cell | 3 studies | 47% ± 24% | |
abnormal cell | 3 studies | 20% ± 5% | |
enteroendocrine cell | 3 studies | 21% ± 4% | |
gamma-delta T cell | 3 studies | 24% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 9109.68 | 459 / 459 | 100% | 192.40 | 1118 / 1118 |
esophagus | 100% | 7756.21 | 1445 / 1445 | 100% | 166.86 | 183 / 183 |
lung | 100% | 8418.20 | 578 / 578 | 100% | 172.33 | 1155 / 1155 |
ovary | 100% | 8103.17 | 180 / 180 | 100% | 137.25 | 430 / 430 |
pancreas | 100% | 7722.39 | 328 / 328 | 100% | 148.78 | 178 / 178 |
prostate | 100% | 8308.10 | 245 / 245 | 100% | 206.51 | 502 / 502 |
stomach | 100% | 6935.29 | 359 / 359 | 100% | 162.31 | 286 / 286 |
uterus | 100% | 9058.32 | 170 / 170 | 100% | 119.65 | 458 / 459 |
intestine | 100% | 8115.44 | 966 / 966 | 100% | 155.90 | 525 / 527 |
bladder | 100% | 8429.05 | 21 / 21 | 99% | 134.11 | 501 / 504 |
thymus | 100% | 7826.37 | 653 / 653 | 99% | 146.25 | 601 / 605 |
brain | 99% | 5011.90 | 2613 / 2642 | 100% | 118.79 | 705 / 705 |
skin | 100% | 10863.20 | 1809 / 1809 | 99% | 150.75 | 466 / 472 |
kidney | 100% | 5484.21 | 89 / 89 | 99% | 125.66 | 888 / 901 |
adrenal gland | 100% | 8169.75 | 258 / 258 | 98% | 118.52 | 225 / 230 |
liver | 100% | 5204.85 | 225 / 226 | 98% | 81.23 | 398 / 406 |
adipose | 100% | 9835.13 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 11006.66 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 138.85 | 29 / 29 |
spleen | 100% | 6676.35 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 88.42 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 50.28 | 1 / 1 |
muscle | 100% | 3982.60 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 5876.06 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 6347.54 | 895 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 101.13 | 76 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008344 | Biological process | adult locomotory behavior |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0006890 | Biological process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
GO_0043473 | Biological process | pigmentation |
GO_0021691 | Biological process | cerebellar Purkinje cell layer maturation |
GO_0051645 | Biological process | Golgi localization |
GO_0000139 | Cellular component | Golgi membrane |
GO_0030126 | Cellular component | COPI vesicle coat |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0030133 | Cellular component | transport vesicle |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | ARCN1 |
Protein name | Coatomer subunit delta Coatomer subunit delta (Archain) (Delta-coat protein) (Delta-COP) |
Synonyms | hCG_40220 COPD |
Description | FUNCTION: Component of the coatomer, a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors (By similarity). . FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. . FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. . FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. . FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. . |
Accessions | Q6P1Q5 ENST00000264028.5 [P48444-1] P48444 ENST00000359415.8 ENST00000392859.7 [P48444-2] B0YIW6 E9PK34 B0YIW5 ENST00000534182.2 |