RPS17 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	40 studies	69% ± 26%	Explore
macrophage	33 studies	63% ± 27%	Explore
natural killer cell	33 studies	68% ± 24%	Explore
fibroblast	31 studies	71% ± 25%	Explore
CD4-positive, alpha-beta T cell	30 studies	67% ± 25%	Explore
CD8-positive, alpha-beta T cell	30 studies	64% ± 27%	Explore
T cell	29 studies	66% ± 30%	Explore
endothelial cell	29 studies	66% ± 29%	Explore
smooth muscle cell	25 studies	68% ± 26%	Explore
pericyte	24 studies	66% ± 26%	Explore
classical monocyte	24 studies	55% ± 26%	Explore
dendritic cell	23 studies	70% ± 28%	Explore
conventional dendritic cell	23 studies	77% ± 19%	Explore
non-classical monocyte	21 studies	60% ± 22%	Explore
mast cell	20 studies	60% ± 24%	Explore
plasma cell	20 studies	70% ± 22%	Explore
plasmacytoid dendritic cell	20 studies	68% ± 27%	Explore
regulatory T cell	20 studies	64% ± 23%	Explore
memory B cell	19 studies	62% ± 25%	Explore
epithelial cell	19 studies	71% ± 27%	Explore
endothelial cell of lymphatic vessel	18 studies	72% ± 22%	Explore
mature NK T cell	18 studies	59% ± 22%	Explore
monocyte	17 studies	71% ± 26%	Explore
basal cell	17 studies	64% ± 33%	Explore
gamma-delta T cell	16 studies	65% ± 24%	Explore
connective tissue cell	15 studies	67% ± 27%	Explore
naive B cell	14 studies	66% ± 18%	Explore
mucosal invariant T cell	14 studies	56% ± 23%	Explore
capillary endothelial cell	13 studies	53% ± 22%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	12 studies	56% ± 24%	Explore
myofibroblast cell	12 studies	72% ± 27%	Explore
CD16-negative, CD56-bright natural killer cell, human	11 studies	48% ± 22%	Explore
CD16-positive, CD56-dim natural killer cell, human	11 studies	48% ± 21%	Explore
endothelial cell of artery	11 studies	59% ± 25%	Explore
vein endothelial cell	11 studies	65% ± 23%	Explore
secretory cell	10 studies	64% ± 31%	Explore
myeloid cell	10 studies	56% ± 26%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	9 studies	59% ± 24%	Explore
plasmablast	9 studies	68% ± 25%	Explore
effector memory CD8-positive, alpha-beta T cell	9 studies	38% ± 10%	Explore
progenitor cell	9 studies	85% ± 23%	Explore
innate lymphoid cell	9 studies	71% ± 25%	Explore
goblet cell	9 studies	62% ± 30%	Explore
IgG plasma cell	9 studies	53% ± 29%	Explore
endothelial cell of vascular tree	9 studies	87% ± 8%	Explore
ciliated cell	9 studies	70% ± 21%	Explore
CD8-positive, alpha-beta memory T cell	9 studies	61% ± 21%	Explore
type II pneumocyte	8 studies	70% ± 30%	Explore
T follicular helper cell	8 studies	74% ± 25%	Explore
type I pneumocyte	7 studies	59% ± 22%	Explore
epithelial cell of proximal tubule	7 studies	73% ± 19%	Explore
leukocyte	7 studies	67% ± 31%	Explore
mesothelial cell	7 studies	75% ± 20%	Explore
IgA plasma cell	7 studies	49% ± 30%	Explore
CD4-positive, alpha-beta memory T cell	7 studies	57% ± 21%	Explore
kidney loop of Henle epithelial cell	6 studies	69% ± 21%	Explore
renal alpha-intercalated cell	6 studies	88% ± 15%	Explore
hematopoietic stem cell	6 studies	78% ± 25%	Explore
erythrocyte	6 studies	57% ± 28%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	59% ± 18%	Explore
alveolar macrophage	5 studies	74% ± 18%	Explore
hematopoietic precursor cell	5 studies	59% ± 26%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	79% ± 24%	Explore
megakaryocyte	5 studies	60% ± 25%	Explore
abnormal cell	5 studies	63% ± 29%	Explore
astrocyte	5 studies	40% ± 15%	Explore
microglial cell	5 studies	68% ± 22%	Explore
neuron	5 studies	52% ± 17%	Explore
enterocyte	5 studies	70% ± 22%	Explore
erythroblast	5 studies	55% ± 29%	Explore
transit amplifying cell	5 studies	75% ± 25%	Explore
precursor B cell	5 studies	56% ± 25%	Explore
immature B cell	5 studies	61% ± 25%	Explore
CD4-positive helper T cell	4 studies	52% ± 25%	Explore
mononuclear phagocyte	4 studies	66% ± 29%	Explore
glomerular endothelial cell	4 studies	66% ± 25%	Explore
kidney connecting tubule epithelial cell	4 studies	84% ± 16%	Explore
neutrophil	4 studies	73% ± 6%	Explore
podocyte	4 studies	78% ± 24%	Explore
intestinal crypt stem cell	4 studies	63% ± 37%	Explore
OFF-bipolar cell	4 studies	43% ± 30%	Explore
retinal cone cell	4 studies	43% ± 30%	Explore
retinal rod cell	4 studies	47% ± 25%	Explore
adventitial cell	4 studies	70% ± 25%	Explore
club cell	4 studies	70% ± 28%	Explore
respiratory goblet cell	4 studies	64% ± 20%	Explore
Mueller cell	4 studies	48% ± 25%	Explore
germinal center B cell	4 studies	78% ± 18%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	72% ± 19%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	55% ± 32%	Explore
granulocyte	4 studies	77% ± 28%	Explore
IgM plasma cell	4 studies	69% ± 16%	Explore
intermediate monocyte	4 studies	61% ± 28%	Explore
group 3 innate lymphoid cell	4 studies	72% ± 22%	Explore
T-helper 1 cell	4 studies	77% ± 25%	Explore
deuterosomal cell	3 studies	62% ± 31%	Explore
precursor cell	3 studies	48% ± 28%	Explore
platelet	3 studies	20% ± 4%	Explore
renal beta-intercalated cell	3 studies	98% ± 1%	Explore
oligodendrocyte	3 studies	26% ± 5%	Explore
enteroendocrine cell	3 studies	86% ± 19%	Explore
neural crest cell	3 studies	94% ± 5%	Explore
ON-bipolar cell	3 studies	51% ± 31%	Explore
GABAergic amacrine cell	3 studies	31% ± 11%	Explore
glycinergic amacrine cell	3 studies	29% ± 9%	Explore
retinal ganglion cell	3 studies	64% ± 33%	Explore
renal principal cell	3 studies	58% ± 23%	Explore
thymocyte	3 studies	97% ± 3%	Explore
extravillous trophoblast	3 studies	98% ± 1%	Explore
placental villous trophoblast	3 studies	99% ± 0%	Explore
common myeloid progenitor	3 studies	66% ± 30%	Explore
lymphocyte	3 studies	75% ± 18%	Explore
pro-B cell	3 studies	54% ± 25%	Explore
glial cell	3 studies	50% ± 20%	Explore
neuroendocrine cell	3 studies	59% ± 31%	Explore
brush cell	3 studies	70% ± 36%	Explore
duct epithelial cell	3 studies	95% ± 0%	Explore
mucus secreting cell	3 studies	94% ± 3%	Explore
serous secreting cell	3 studies	78% ± 14%	Explore
tissue-resident macrophage	3 studies	61% ± 30%	Explore
retina horizontal cell	3 studies	30% ± 10%	Explore
endothelial cell of sinusoid	3 studies	56% ± 32%	Explore
myoepithelial cell	3 studies	82% ± 16%	Explore
inflammatory macrophage	3 studies	71% ± 20%	Explore
effector CD8-positive, alpha-beta T cell	3 studies	61% ± 33%	Explore
luminal cell of prostate epithelium	3 studies	94% ± 6%	Explore
granulocyte monocyte progenitor cell	3 studies	73% ± 19%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	64% ± 32%	Explore
T-helper 17 cell	3 studies	91% ± 9%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	3 studies	51% ± 5%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	47% ± 25%	Explore
central memory CD8-positive, alpha-beta T cell	3 studies	50% ± 24%	Explore
progenitor cell of mammary luminal epithelium	3 studies	71% ± 30%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	16 studies	57% ± 26%	Explore
lung	15 studies	60% ± 28%	Explore
intestine	12 studies	59% ± 30%	Explore
kidney	7 studies	76% ± 18%	Explore
eye	7 studies	45% ± 23%	Explore
bone marrow	5 studies	62% ± 29%	Explore
uterus	5 studies	81% ± 13%	Explore
liver	5 studies	45% ± 32%	Explore
brain	4 studies	49% ± 24%	Explore
placenta	4 studies	89% ± 12%	Explore
prostate	4 studies	83% ± 19%	Explore
breast	4 studies	56% ± 23%	Explore
lymph node	3 studies	78% ± 25%	Explore
adipose	3 studies	33% ± 17%	Explore
thymus	3 studies	78% ± 23%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	32441.32	1445 / 1445	100%	5.41	183 / 183
ovary	100%	60455.82	180 / 180	100%	6.47	429 / 430
bladder	100%	32592.38	21 / 21	100%	5.86	502 / 504
uterus	100%	33634.46	170 / 170	100%	6.40	457 / 459
stomach	100%	25491.03	359 / 359	99%	5.08	284 / 286
intestine	100%	28525.51	966 / 966	99%	6.40	522 / 527
pancreas	100%	35812.59	328 / 328	98%	4.26	175 / 178
breast	100%	38807.45	459 / 459	98%	4.01	1094 / 1118
lung	100%	24695.75	576 / 578	98%	5.15	1133 / 1155
prostate	100%	31220.30	245 / 245	97%	4.59	487 / 502
skin	100%	50209.46	1809 / 1809	94%	4.70	445 / 472
thymus	100%	24570.21	653 / 653	94%	3.06	566 / 605
brain	98%	11749.24	2578 / 2642	96%	3.26	674 / 705
adrenal gland	100%	29466.17	258 / 258	93%	2.30	213 / 230
liver	100%	16966.37	226 / 226	83%	2.26	339 / 406
kidney	100%	24283.72	89 / 89	80%	2.23	720 / 901
lymph node	0%	0	0 / 0	100%	6.32	29 / 29
spleen	100%	32784.68	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	4.38	45 / 45
ureter	0%	0	0 / 0	100%	5.87	1 / 1
blood vessel	100%	25680.54	1334 / 1335	0%	0	0 / 0
adipose	100%	35091.25	1203 / 1204	0%	0	0 / 0
muscle	98%	16888.89	790 / 803	0%	0	0 / 0
heart	98%	14900.61	844 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	95%	4.72	76 / 80
peripheral blood	57%	20692.51	528 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006412	Biological process	translation
GO_0006413	Biological process	translational initiation
GO_0042274	Biological process	ribosomal small subunit biogenesis
GO_0034101	Biological process	erythrocyte homeostasis
GO_0006364	Biological process	rRNA processing
GO_0002181	Biological process	cytoplasmic translation
GO_0005730	Cellular component	nucleolus
GO_0022626	Cellular component	cytosolic ribosome
GO_0022627	Cellular component	cytosolic small ribosomal subunit
GO_0005840	Cellular component	ribosome
GO_0016020	Cellular component	membrane
GO_0032040	Cellular component	small-subunit processome
GO_0005654	Cellular component	nucleoplasm
GO_0005925	Cellular component	focal adhesion
GO_0005829	Cellular component	cytosol
GO_0045202	Cellular component	synapse
GO_0005737	Cellular component	cytoplasm
GO_0003735	Molecular function	structural constituent of ribosome
GO_0003723	Molecular function	RNA binding

IV. Literature review

[source]

Gene name	RPS17
Protein name	Small ribosomal subunit protein eS17 (40S ribosomal protein S17) Ribosomal protein S17
Synonyms	RPS17L
Description	FUNCTION: Component of the small ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome . .
Accessions	ENST00000632419.1 ENST00000647841.1 ENST00000561157.5 H0YN88 H0YN73 ENST00000617731.2 A0A075B716 ENST00000558397.1 P08708 ENST00000632799.1 ENST00000561068.5

RPS17 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review