Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 23% ± 4% |
Insufficient scRNA-seq data for expression of TBL3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 2076.68 | 258 / 258 | 100% | 19.90 | 230 / 230 |
esophagus | 100% | 2529.23 | 1445 / 1445 | 100% | 21.58 | 183 / 183 |
ovary | 100% | 2273.13 | 180 / 180 | 100% | 23.67 | 430 / 430 |
pancreas | 100% | 1809.91 | 328 / 328 | 100% | 22.77 | 178 / 178 |
thymus | 100% | 2548.27 | 653 / 653 | 100% | 25.47 | 604 / 605 |
uterus | 100% | 2714.51 | 170 / 170 | 100% | 29.57 | 458 / 459 |
liver | 100% | 1456.79 | 225 / 226 | 100% | 18.50 | 406 / 406 |
brain | 99% | 1681.91 | 2626 / 2642 | 100% | 24.71 | 705 / 705 |
skin | 100% | 3458.72 | 1809 / 1809 | 99% | 32.35 | 469 / 472 |
kidney | 100% | 2062.02 | 89 / 89 | 99% | 21.12 | 894 / 901 |
prostate | 100% | 2648.33 | 245 / 245 | 99% | 28.25 | 498 / 502 |
intestine | 100% | 2195.35 | 966 / 966 | 99% | 27.47 | 522 / 527 |
breast | 100% | 2583.45 | 459 / 459 | 99% | 29.38 | 1105 / 1118 |
bladder | 100% | 2367.10 | 21 / 21 | 99% | 26.30 | 497 / 504 |
stomach | 100% | 1965.46 | 359 / 359 | 98% | 23.60 | 281 / 286 |
lung | 100% | 2182.03 | 577 / 578 | 98% | 21.67 | 1135 / 1155 |
adipose | 100% | 2205.78 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 42.45 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 40.20 | 29 / 29 |
muscle | 100% | 3096.39 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2512.30 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 30.19 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 27.74 | 1 / 1 |
blood vessel | 100% | 2032.83 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1564.35 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 93% | 1602.39 | 864 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000480 | Biological process | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
GO_0000472 | Biological process | endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
GO_0042274 | Biological process | ribosomal small subunit biogenesis |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0030686 | Cellular component | 90S preribosome |
GO_0032040 | Cellular component | small-subunit processome |
GO_0034511 | Molecular function | U3 snoRNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | TBL3 |
Protein name | Transducin beta-like protein 3 (WD repeat-containing protein SAZD) Transducin beta like 3 TBL3 protein |
Synonyms | SAZD |
Description | FUNCTION: Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome. . |
Accessions | Q12788 ENST00000568546.6 A0JLS5 ENST00000709263.1 J3KNP2 H3BN88 ENST00000561907.5 ENST00000332704.5 |