Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 28% ± 11% | |
plasma cell | 13 studies | 43% ± 14% | |
fibroblast | 13 studies | 23% ± 6% | |
glutamatergic neuron | 11 studies | 48% ± 24% | |
astrocyte | 10 studies | 28% ± 12% | |
oligodendrocyte precursor cell | 9 studies | 32% ± 12% | |
epithelial cell | 8 studies | 30% ± 20% | |
plasmablast | 7 studies | 40% ± 18% | |
neuron | 7 studies | 40% ± 15% | |
GABAergic neuron | 7 studies | 46% ± 17% | |
IgG plasma cell | 6 studies | 24% ± 8% | |
interneuron | 6 studies | 43% ± 17% | |
retina horizontal cell | 6 studies | 23% ± 7% | |
pericyte | 6 studies | 19% ± 3% | |
myofibroblast cell | 5 studies | 22% ± 5% | |
IgA plasma cell | 5 studies | 28% ± 13% | |
macrophage | 5 studies | 25% ± 6% | |
endothelial cell of lymphatic vessel | 5 studies | 27% ± 7% | |
connective tissue cell | 5 studies | 25% ± 7% | |
progenitor cell | 4 studies | 26% ± 5% | |
B cell | 4 studies | 23% ± 7% | |
granule cell | 4 studies | 31% ± 7% | |
retinal ganglion cell | 4 studies | 31% ± 13% | |
retinal bipolar neuron | 4 studies | 25% ± 3% | |
lymphocyte | 4 studies | 16% ± 1% | |
type II pneumocyte | 4 studies | 18% ± 4% | |
dendritic cell | 4 studies | 22% ± 3% | |
oligodendrocyte | 4 studies | 23% ± 10% | |
abnormal cell | 3 studies | 33% ± 14% | |
vein endothelial cell | 3 studies | 25% ± 13% | |
GABAergic interneuron | 3 studies | 24% ± 9% | |
microglial cell | 3 studies | 24% ± 5% | |
amacrine cell | 3 studies | 25% ± 4% | |
retinal pigment epithelial cell | 3 studies | 27% ± 13% | |
ciliated cell | 3 studies | 25% ± 6% | |
myeloid cell | 3 studies | 26% ± 7% | |
GABAergic amacrine cell | 3 studies | 19% ± 1% | |
OFF-bipolar cell | 3 studies | 29% ± 4% | |
rod bipolar cell | 3 studies | 19% ± 2% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 34% ± 7% | |
basal cell | 3 studies | 36% ± 14% | |
goblet cell | 3 studies | 35% ± 24% | |
transit amplifying cell | 3 studies | 36% ± 19% | |
adipocyte | 3 studies | 23% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1301.97 | 459 / 459 | 100% | 21.90 | 1116 / 1118 |
thymus | 100% | 1646.78 | 653 / 653 | 100% | 23.46 | 603 / 605 |
prostate | 100% | 1630.95 | 245 / 245 | 100% | 17.19 | 500 / 502 |
lung | 100% | 1264.96 | 576 / 578 | 100% | 18.30 | 1154 / 1155 |
esophagus | 100% | 1049.28 | 1445 / 1445 | 99% | 15.48 | 182 / 183 |
intestine | 100% | 1454.90 | 966 / 966 | 99% | 13.91 | 524 / 527 |
uterus | 100% | 1601.50 | 170 / 170 | 99% | 21.65 | 456 / 459 |
bladder | 100% | 1333.52 | 21 / 21 | 99% | 16.44 | 500 / 504 |
stomach | 100% | 1488.62 | 359 / 359 | 99% | 13.17 | 283 / 286 |
skin | 100% | 2304.49 | 1809 / 1809 | 99% | 23.92 | 465 / 472 |
adrenal gland | 100% | 1089.02 | 258 / 258 | 98% | 20.17 | 226 / 230 |
pancreas | 100% | 838.30 | 327 / 328 | 98% | 14.85 | 175 / 178 |
ovary | 100% | 1187.75 | 180 / 180 | 98% | 14.30 | 421 / 430 |
kidney | 100% | 1265.85 | 89 / 89 | 97% | 13.75 | 878 / 901 |
brain | 97% | 1524.50 | 2575 / 2642 | 99% | 16.26 | 700 / 705 |
liver | 79% | 359.72 | 178 / 226 | 74% | 8.50 | 302 / 406 |
adipose | 100% | 1233.31 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 1678.52 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.37 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.21 | 1 / 1 |
blood vessel | 100% | 1000.71 | 1331 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 891.53 | 793 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 16.01 | 28 / 29 |
heart | 95% | 668.40 | 821 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 10.85 | 64 / 80 |
peripheral blood | 43% | 1208.19 | 397 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0003723 | Molecular function | RNA binding |
Gene name | SPATS2 |
Protein name | Spermatogenesis-associated serine-rich protein 2 (Serine-rich spermatocytes and round spermatid 59 kDa protein) (p59scr) Spermatogenesis associated serine rich 2 |
Synonyms | SPATA10 Nbla00526 SCR59 |
Description | |
Accessions | F8VXP9 ENST00000552918.6 ENST00000551540.5 ENST00000553127.5 ENST00000548710.5 ENST00000547865.5 F8VRH4 ENST00000550997.5 F8VXB3 ENST00000548654.5 F8VX46 F8VVF0 F8VZS5 F8VX66 ENST00000549412.5 ENST00000549298.5 A0A0G2JL06 ENST00000549538.5 ENST00000552171.1 F8W1X1 Q86XZ4 ENST00000548377.5 F8VS10 F8W128 ENST00000550643.5 ENST00000321898.10 ENST00000549045.5 A0A0G2JL58 ENST00000548777.5 |