Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 19 studies | 83% ± 13% | |
lung | 18 studies | 79% ± 14% | |
intestine | 14 studies | 74% ± 24% | |
brain | 13 studies | 42% ± 20% | |
eye | 10 studies | 46% ± 22% | |
kidney | 8 studies | 69% ± 26% | |
bone marrow | 6 studies | 87% ± 11% | |
liver | 6 studies | 68% ± 22% | |
pancreas | 5 studies | 84% ± 16% | |
uterus | 5 studies | 89% ± 9% | |
lymph node | 4 studies | 91% ± 9% | |
placenta | 4 studies | 83% ± 19% | |
esophagus | 4 studies | 70% ± 25% | |
prostate | 4 studies | 92% ± 8% | |
breast | 4 studies | 82% ± 12% | |
heart | 3 studies | 50% ± 18% | |
adipose | 3 studies | 43% ± 28% | |
skin | 3 studies | 72% ± 25% | |
stomach | 3 studies | 52% ± 32% | |
thymus | 3 studies | 75% ± 32% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 36538.67 | 21 / 21 | 100% | 453.55 | 504 / 504 |
esophagus | 100% | 31146.30 | 1445 / 1445 | 100% | 235.10 | 183 / 183 |
ovary | 100% | 75055.12 | 180 / 180 | 100% | 435.27 | 430 / 430 |
pancreas | 100% | 27687.52 | 328 / 328 | 100% | 404.20 | 178 / 178 |
uterus | 100% | 40902.29 | 170 / 170 | 100% | 464.85 | 459 / 459 |
thymus | 100% | 29203.83 | 653 / 653 | 100% | 546.77 | 604 / 605 |
lung | 100% | 26190.49 | 577 / 578 | 100% | 384.62 | 1155 / 1155 |
prostate | 100% | 35817.69 | 245 / 245 | 100% | 647.74 | 501 / 502 |
brain | 100% | 22172.90 | 2634 / 2642 | 100% | 298.00 | 705 / 705 |
stomach | 100% | 24598.81 | 359 / 359 | 100% | 370.73 | 285 / 286 |
breast | 100% | 41118.96 | 459 / 459 | 100% | 417.54 | 1114 / 1118 |
intestine | 100% | 31035.81 | 966 / 966 | 100% | 473.52 | 525 / 527 |
skin | 100% | 40721.32 | 1809 / 1809 | 100% | 383.00 | 470 / 472 |
kidney | 100% | 26677.53 | 89 / 89 | 99% | 342.77 | 896 / 901 |
liver | 100% | 13017.02 | 225 / 226 | 100% | 281.26 | 405 / 406 |
adrenal gland | 100% | 25551.62 | 258 / 258 | 98% | 308.75 | 225 / 230 |
adipose | 100% | 36348.17 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 29415.60 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 711.95 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 639.07 | 29 / 29 |
spleen | 100% | 29909.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 355.02 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 331.94 | 1 / 1 |
muscle | 99% | 20488.14 | 794 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 17551.92 | 837 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 44% | 18116.81 | 409 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0022626 | Cellular component | cytosolic ribosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0005737 | Cellular component | cytoplasm |
GO_0005925 | Cellular component | focal adhesion |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPL31 |
Protein name | Large ribosomal subunit protein eL31 (60S ribosomal protein L31) |
Synonyms | |
Description | FUNCTION: Component of the large ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . . |
Accessions | ENST00000409733.5 [P62899-1] ENST00000409650.5 ENST00000409711.1 B7Z4C8 ENST00000456292.5 P62899 B7Z4E3 ENST00000419276.1 ENST00000264258.8 [P62899-1] ENST00000409320.7 [P62899-3] ENST00000409028.8 [P62899-2] C9JU56 ENST00000441435.1 ENST00000409038.5 H7C2W9 ENST00000409000.5 B8ZZK4 |