Name | Number of supported studies | Average coverage | |
---|---|---|---|
classical monocyte | 7 studies | 23% ± 10% | |
natural killer cell | 6 studies | 20% ± 3% | |
epithelial cell | 6 studies | 35% ± 18% | |
non-classical monocyte | 4 studies | 31% ± 10% | |
B cell | 4 studies | 21% ± 1% | |
CD16-positive, CD56-dim natural killer cell, human | 4 studies | 17% ± 3% | |
CD4-positive, alpha-beta T cell | 4 studies | 23% ± 6% | |
CD8-positive, alpha-beta T cell | 4 studies | 20% ± 1% | |
conventional dendritic cell | 4 studies | 32% ± 17% | |
endothelial cell | 4 studies | 22% ± 4% | |
fibroblast | 4 studies | 20% ± 6% | |
ciliated cell | 4 studies | 33% ± 14% | |
dendritic cell | 4 studies | 35% ± 20% | |
basal cell | 4 studies | 28% ± 14% | |
naive B cell | 3 studies | 17% ± 2% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 18% ± 2% | |
macrophage | 3 studies | 23% ± 4% | |
plasmacytoid dendritic cell | 3 studies | 24% ± 4% | |
regulatory T cell | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 458.47 | 1445 / 1445 | 100% | 18.86 | 183 / 183 |
ovary | 100% | 347.89 | 180 / 180 | 100% | 16.72 | 430 / 430 |
breast | 100% | 431.28 | 459 / 459 | 100% | 14.61 | 1116 / 1118 |
prostate | 100% | 391.12 | 245 / 245 | 100% | 9.00 | 501 / 502 |
lung | 100% | 424.61 | 577 / 578 | 100% | 14.16 | 1154 / 1155 |
uterus | 100% | 390.40 | 170 / 170 | 100% | 12.30 | 457 / 459 |
pancreas | 100% | 315.84 | 328 / 328 | 99% | 8.42 | 177 / 178 |
intestine | 100% | 425.86 | 966 / 966 | 99% | 11.65 | 524 / 527 |
brain | 99% | 331.70 | 2625 / 2642 | 100% | 10.10 | 705 / 705 |
thymus | 100% | 372.09 | 652 / 653 | 100% | 9.25 | 602 / 605 |
stomach | 100% | 360.55 | 359 / 359 | 99% | 14.31 | 284 / 286 |
bladder | 100% | 403.67 | 21 / 21 | 99% | 11.35 | 500 / 504 |
skin | 100% | 588.49 | 1808 / 1809 | 99% | 10.67 | 468 / 472 |
kidney | 100% | 395.12 | 89 / 89 | 98% | 7.24 | 887 / 901 |
liver | 100% | 323.86 | 226 / 226 | 96% | 5.94 | 391 / 406 |
adrenal gland | 100% | 494.74 | 258 / 258 | 91% | 4.59 | 210 / 230 |
adipose | 100% | 449.41 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.70 | 29 / 29 |
muscle | 100% | 519.67 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 376.07 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 12.21 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.56 | 1 / 1 |
blood vessel | 100% | 357.59 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 549.07 | 920 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 325.89 | 832 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 6.17 | 77 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | LSM12 |
Protein name | Protein LSM12 LSM12 homolog |
Synonyms | |
Description | FUNCTION: Nicotinic acid adenine dinucleotide phosphate (NAADP) binding protein . Confers NAADP sensitivity to the two pore channel complex (TPCs) by acting as TPC accessory protein necessary for NAADP-evoked Ca(2+) release . . |
Accessions | Q3MHD2 ENST00000293406.8 [Q3MHD2-1] K7ELG9 ENST00000591247.6 [Q3MHD2-1] ENST00000585388.2 |