Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 14 studies | 34% ± 20% | |
endothelial cell | 14 studies | 29% ± 14% | |
fibroblast | 8 studies | 23% ± 5% | |
CD4-positive, alpha-beta T cell | 4 studies | 19% ± 4% | |
pericyte | 4 studies | 30% ± 4% | |
endothelial cell of vascular tree | 4 studies | 20% ± 5% | |
epithelial cell | 4 studies | 33% ± 13% | |
capillary endothelial cell | 4 studies | 27% ± 10% | |
neuron | 4 studies | 57% ± 22% | |
oligodendrocyte precursor cell | 4 studies | 28% ± 12% | |
basal cell | 4 studies | 25% ± 9% | |
regulatory T cell | 4 studies | 19% ± 2% | |
B cell | 3 studies | 22% ± 4% | |
natural killer cell | 3 studies | 18% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 3 studies | 26% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1592.11 | 2642 / 2642 | 100% | 57.24 | 705 / 705 |
esophagus | 100% | 878.35 | 1445 / 1445 | 100% | 27.96 | 183 / 183 |
ovary | 100% | 1397.40 | 180 / 180 | 100% | 39.21 | 430 / 430 |
stomach | 100% | 804.14 | 359 / 359 | 100% | 33.33 | 286 / 286 |
kidney | 100% | 989.81 | 89 / 89 | 100% | 30.98 | 900 / 901 |
thymus | 100% | 1342.93 | 653 / 653 | 100% | 44.35 | 604 / 605 |
prostate | 100% | 955.73 | 245 / 245 | 100% | 32.10 | 501 / 502 |
skin | 100% | 1369.73 | 1809 / 1809 | 100% | 43.76 | 471 / 472 |
uterus | 100% | 1218.95 | 170 / 170 | 100% | 45.04 | 458 / 459 |
liver | 100% | 906.54 | 226 / 226 | 100% | 24.56 | 405 / 406 |
lung | 100% | 1138.95 | 576 / 578 | 100% | 37.69 | 1155 / 1155 |
breast | 100% | 1221.13 | 459 / 459 | 100% | 33.46 | 1113 / 1118 |
intestine | 100% | 970.12 | 966 / 966 | 99% | 37.59 | 524 / 527 |
bladder | 100% | 915.81 | 21 / 21 | 99% | 40.47 | 501 / 504 |
adrenal gland | 100% | 1021.66 | 258 / 258 | 99% | 104.24 | 227 / 230 |
pancreas | 97% | 412.95 | 318 / 328 | 99% | 31.68 | 176 / 178 |
adipose | 100% | 1176.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 39.12 | 29 / 29 |
spleen | 100% | 1114.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 37.83 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 25.77 | 1 / 1 |
blood vessel | 100% | 889.13 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1136.90 | 855 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 22.69 | 79 / 80 |
muscle | 87% | 341.93 | 698 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 81% | 600.01 | 749 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0018095 | Biological process | protein polyglutamylation |
GO_0060271 | Biological process | cilium assembly |
GO_2000147 | Biological process | positive regulation of cell motility |
GO_0060296 | Biological process | regulation of cilium beat frequency involved in ciliary motility |
GO_2000253 | Biological process | positive regulation of feeding behavior |
GO_0005814 | Cellular component | centriole |
GO_0005879 | Cellular component | axonemal microtubule |
GO_0031514 | Cellular component | motile cilium |
GO_0005929 | Cellular component | cilium |
GO_0036064 | Cellular component | ciliary basal body |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0160112 | Cellular component | axonemal B tubule inner sheath |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | CFAP20 |
Protein name | Cilia- and flagella-associated protein 20 Cilia- and flagella-associated protein 20 (Basal body up-regulated protein 22) (Transcription factor IIB) |
Synonyms | C16orf80 BUG22 GTL3 |
Description | FUNCTION: Cilium- and flagellum-specific protein that plays a role in axonemal structure organization and motility . Microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating . Involved in the regulation of the size and morphology of cilia . Required for axonemal microtubules polyglutamylation . . |
Accessions | ENST00000565880.1 ENST00000262498.8 Q9Y6A4 H3BPA3 |