Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 27 studies | 24% ± 9% | |
endothelial cell | 26 studies | 29% ± 13% | |
fibroblast | 16 studies | 24% ± 10% | |
smooth muscle cell | 13 studies | 21% ± 5% | |
oligodendrocyte precursor cell | 10 studies | 33% ± 16% | |
epithelial cell | 10 studies | 33% ± 21% | |
oligodendrocyte | 9 studies | 27% ± 13% | |
astrocyte | 8 studies | 29% ± 16% | |
ciliated cell | 8 studies | 33% ± 17% | |
capillary endothelial cell | 7 studies | 19% ± 3% | |
neuron | 7 studies | 38% ± 21% | |
basal cell | 7 studies | 27% ± 6% | |
plasmacytoid dendritic cell | 7 studies | 24% ± 7% | |
endothelial cell of lymphatic vessel | 6 studies | 22% ± 8% | |
glutamatergic neuron | 6 studies | 35% ± 20% | |
interneuron | 6 studies | 30% ± 16% | |
endothelial cell of vascular tree | 6 studies | 22% ± 4% | |
GABAergic neuron | 5 studies | 33% ± 17% | |
myofibroblast cell | 5 studies | 21% ± 2% | |
goblet cell | 5 studies | 26% ± 7% | |
connective tissue cell | 5 studies | 20% ± 3% | |
squamous epithelial cell | 4 studies | 47% ± 18% | |
abnormal cell | 4 studies | 27% ± 4% | |
endothelial cell of artery | 4 studies | 20% ± 2% | |
amacrine cell | 4 studies | 34% ± 4% | |
microglial cell | 4 studies | 29% ± 15% | |
plasma cell | 4 studies | 24% ± 10% | |
club cell | 4 studies | 24% ± 5% | |
retina horizontal cell | 4 studies | 20% ± 5% | |
retinal pigment epithelial cell | 4 studies | 20% ± 8% | |
type I pneumocyte | 4 studies | 24% ± 4% | |
enteroendocrine cell | 4 studies | 27% ± 12% | |
secretory cell | 4 studies | 31% ± 10% | |
glomerular endothelial cell | 3 studies | 17% ± 0% | |
retinal bipolar neuron | 3 studies | 27% ± 2% | |
Mueller cell | 3 studies | 20% ± 2% | |
rod bipolar cell | 3 studies | 24% ± 3% | |
dendritic cell | 3 studies | 29% ± 9% | |
transit amplifying cell | 3 studies | 23% ± 6% | |
macrophage | 3 studies | 27% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 7597.65 | 1445 / 1445 | 100% | 28.16 | 183 / 183 |
skin | 100% | 10545.32 | 1809 / 1809 | 100% | 44.65 | 472 / 472 |
uterus | 100% | 11919.72 | 170 / 170 | 100% | 45.22 | 459 / 459 |
brain | 100% | 7189.91 | 2640 / 2642 | 100% | 65.42 | 705 / 705 |
bladder | 100% | 7877.38 | 21 / 21 | 100% | 39.65 | 503 / 504 |
prostate | 100% | 10147.05 | 245 / 245 | 100% | 38.85 | 501 / 502 |
ovary | 100% | 12540.19 | 180 / 180 | 100% | 21.15 | 429 / 430 |
lung | 100% | 11236.08 | 578 / 578 | 100% | 36.89 | 1150 / 1155 |
pancreas | 100% | 4490.39 | 328 / 328 | 99% | 35.95 | 177 / 178 |
thymus | 100% | 8343.64 | 653 / 653 | 99% | 30.99 | 601 / 605 |
intestine | 100% | 7604.36 | 966 / 966 | 99% | 30.81 | 523 / 527 |
breast | 100% | 11448.58 | 459 / 459 | 99% | 34.01 | 1109 / 1118 |
stomach | 100% | 5555.66 | 359 / 359 | 99% | 24.61 | 282 / 286 |
kidney | 100% | 5919.27 | 89 / 89 | 98% | 25.47 | 887 / 901 |
adrenal gland | 100% | 5734.44 | 258 / 258 | 95% | 24.58 | 218 / 230 |
liver | 85% | 2212.86 | 191 / 226 | 73% | 12.93 | 298 / 406 |
adipose | 100% | 10753.91 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 26.87 | 29 / 29 |
spleen | 100% | 7716.93 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 32.30 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 38.54 | 1 / 1 |
blood vessel | 100% | 9039.38 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 5973.77 | 860 / 861 | 0% | 0 | 0 / 0 |
muscle | 99% | 4048.97 | 794 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 39.20 | 79 / 80 |
peripheral blood | 55% | 2177.92 | 512 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0018105 | Biological process | peptidyl-serine phosphorylation |
GO_0006281 | Biological process | DNA repair |
GO_0006897 | Biological process | endocytosis |
GO_0090263 | Biological process | positive regulation of canonical Wnt signaling pathway |
GO_0007165 | Biological process | signal transduction |
GO_0032436 | Biological process | positive regulation of proteasomal ubiquitin-dependent protein catabolic process |
GO_0032880 | Biological process | regulation of protein localization |
GO_0032922 | Biological process | circadian regulation of gene expression |
GO_0042752 | Biological process | regulation of circadian rhythm |
GO_0060070 | Biological process | canonical Wnt signaling pathway |
GO_0030178 | Biological process | negative regulation of Wnt signaling pathway |
GO_1902004 | Biological process | positive regulation of amyloid-beta formation |
GO_1990090 | Biological process | cellular response to nerve growth factor stimulus |
GO_0048512 | Biological process | circadian behavior |
GO_0008104 | Biological process | protein localization |
GO_0006468 | Biological process | protein phosphorylation |
GO_0032091 | Biological process | negative regulation of protein binding |
GO_2000052 | Biological process | positive regulation of non-canonical Wnt signaling pathway |
GO_0005654 | Cellular component | nucleoplasm |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005829 | Cellular component | cytosol |
GO_0030426 | Cellular component | growth cone |
GO_0005737 | Cellular component | cytoplasm |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0005634 | Cellular component | nucleus |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0004672 | Molecular function | protein kinase activity |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CSNK1E |
Protein name | non-specific serine/threonine protein kinase (EC 2.7.11.1) Casein kinase 1 epsilon Alternative protein CSNK1E Casein kinase I isoform epsilon (CKI-epsilon) (CKIe) (EC 2.7.11.1) |
Synonyms | hCG_2014051 |
Description | FUNCTION: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates (Probable). Participates in Wnt signaling . Phosphorylates DVL1 . Phosphorylates DVL2 . Phosphorylates NEDD9/HEF1 (By similarity). Central component of the circadian clock . In balance with PP1, determines the circadian period length, through the regulation of the speed and rhythmicity of PER1 and PER2 phosphorylation . Controls PER1 and PER2 nuclear transport and degradation (By similarity). Inhibits cytokine-induced granuloytic differentiation . . |
Accessions | ENST00000431632.5 ENST00000430335.1 ENST00000451964.5 ENST00000431611.5 B0QY36 ENST00000612795.2 P49674 ENST00000366216.6 H0Y645 ENST00000413574.6 B0QY35 L8EC90 A0A669KBC0 H0Y682 ENST00000403904.5 ENST00000405675.7 Q5U045 H0Y5S9 ENST00000442216.1 ENST00000359867.7 H7C3J2 B0QY34 H7C0Y5 ENST00000396832.6 |