RPS20 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	48 studies	81% ± 21%	Explore
macrophage	45 studies	66% ± 26%	Explore
endothelial cell	42 studies	67% ± 28%	Explore
natural killer cell	41 studies	76% ± 19%	Explore
T cell	39 studies	71% ± 26%	Explore
fibroblast	39 studies	76% ± 24%	Explore
CD8-positive, alpha-beta T cell	38 studies	75% ± 20%	Explore
CD4-positive, alpha-beta T cell	36 studies	80% ± 19%	Explore
pericyte	32 studies	75% ± 23%	Explore
conventional dendritic cell	30 studies	84% ± 19%	Explore
dendritic cell	29 studies	75% ± 21%	Explore
plasmacytoid dendritic cell	29 studies	77% ± 21%	Explore
smooth muscle cell	26 studies	79% ± 22%	Explore
regulatory T cell	26 studies	78% ± 14%	Explore
plasma cell	25 studies	72% ± 21%	Explore
endothelial cell of lymphatic vessel	25 studies	71% ± 25%	Explore
classical monocyte	25 studies	74% ± 19%	Explore
monocyte	24 studies	69% ± 22%	Explore
mast cell	23 studies	73% ± 20%	Explore
epithelial cell	23 studies	77% ± 27%	Explore
non-classical monocyte	23 studies	76% ± 17%	Explore
mature NK T cell	22 studies	73% ± 19%	Explore
memory B cell	21 studies	86% ± 17%	Explore
basal cell	21 studies	78% ± 22%	Explore
connective tissue cell	20 studies	79% ± 24%	Explore
gamma-delta T cell	20 studies	82% ± 14%	Explore
naive B cell	17 studies	83% ± 13%	Explore
ciliated cell	16 studies	72% ± 16%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	67% ± 18%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	15 studies	87% ± 13%	Explore
capillary endothelial cell	15 studies	62% ± 19%	Explore
vein endothelial cell	15 studies	64% ± 24%	Explore
mucosal invariant T cell	15 studies	81% ± 13%	Explore
myeloid cell	15 studies	70% ± 27%	Explore
CD16-negative, CD56-bright natural killer cell, human	14 studies	73% ± 20%	Explore
endothelial cell of artery	14 studies	62% ± 23%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	76% ± 21%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	13 studies	88% ± 10%	Explore
myofibroblast cell	13 studies	84% ± 12%	Explore
goblet cell	13 studies	66% ± 25%	Explore
endothelial cell of vascular tree	13 studies	78% ± 27%	Explore
plasmablast	12 studies	70% ± 21%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	75% ± 19%	Explore
secretory cell	12 studies	77% ± 25%	Explore
innate lymphoid cell	12 studies	84% ± 14%	Explore
microglial cell	12 studies	52% ± 28%	Explore
effector memory CD8-positive, alpha-beta T cell	11 studies	78% ± 20%	Explore
mesothelial cell	11 studies	74% ± 22%	Explore
progenitor cell	10 studies	85% ± 18%	Explore
astrocyte	10 studies	32% ± 13%	Explore
leukocyte	10 studies	75% ± 29%	Explore
IgG plasma cell	10 studies	57% ± 28%	Explore
type I pneumocyte	9 studies	68% ± 22%	Explore
type II pneumocyte	9 studies	81% ± 20%	Explore
neuron	9 studies	50% ± 14%	Explore
T follicular helper cell	9 studies	83% ± 16%	Explore
erythrocyte	9 studies	58% ± 20%	Explore
club cell	8 studies	68% ± 23%	Explore
platelet	8 studies	39% ± 23%	Explore
neutrophil	8 studies	66% ± 20%	Explore
abnormal cell	8 studies	68% ± 23%	Explore
IgA plasma cell	8 studies	55% ± 30%	Explore
hematopoietic stem cell	8 studies	86% ± 26%	Explore
mononuclear phagocyte	7 studies	82% ± 22%	Explore
epithelial cell of proximal tubule	7 studies	67% ± 22%	Explore
enterocyte	7 studies	65% ± 22%	Explore
enteroendocrine cell	7 studies	67% ± 32%	Explore
transit amplifying cell	7 studies	72% ± 25%	Explore
glutamatergic neuron	7 studies	29% ± 12%	Explore
precursor B cell	7 studies	64% ± 28%	Explore
alveolar macrophage	6 studies	77% ± 26%	Explore
hematopoietic precursor cell	6 studies	73% ± 31%	Explore
ionocyte	6 studies	60% ± 19%	Explore
respiratory goblet cell	6 studies	56% ± 21%	Explore
kidney loop of Henle epithelial cell	6 studies	65% ± 22%	Explore
renal alpha-intercalated cell	6 studies	82% ± 22%	Explore
megakaryocyte	6 studies	62% ± 25%	Explore
erythroblast	6 studies	70% ± 23%	Explore
retinal ganglion cell	6 studies	39% ± 26%	Explore
retinal rod cell	6 studies	45% ± 17%	Explore
brush cell	6 studies	71% ± 24%	Explore
immature B cell	6 studies	83% ± 17%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	85% ± 15%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	74% ± 17%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	77% ± 24%	Explore
oligodendrocyte	5 studies	25% ± 4%	Explore
intestinal crypt stem cell	5 studies	83% ± 26%	Explore
OFF-bipolar cell	5 studies	41% ± 17%	Explore
ON-bipolar cell	5 studies	39% ± 18%	Explore
retinal cone cell	5 studies	56% ± 25%	Explore
pro-B cell	5 studies	61% ± 29%	Explore
glial cell	5 studies	60% ± 18%	Explore
T-helper 17 cell	5 studies	88% ± 12%	Explore
Mueller cell	5 studies	53% ± 16%	Explore
amacrine cell	5 studies	33% ± 14%	Explore
inflammatory macrophage	5 studies	72% ± 16%	Explore
double negative thymocyte	5 studies	86% ± 10%	Explore
CD4-positive helper T cell	5 studies	88% ± 7%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	81% ± 12%	Explore
granulocyte	5 studies	86% ± 16%	Explore
GABAergic neuron	5 studies	26% ± 6%	Explore
intermediate monocyte	5 studies	74% ± 19%	Explore
melanocyte	5 studies	73% ± 20%	Explore
deuterosomal cell	4 studies	57% ± 15%	Explore
duct epithelial cell	4 studies	79% ± 29%	Explore
exhausted T cell	4 studies	65% ± 19%	Explore
precursor cell	4 studies	61% ± 26%	Explore
pancreatic A cell	4 studies	93% ± 8%	Explore
type B pancreatic cell	4 studies	89% ± 13%	Explore
glomerular endothelial cell	4 studies	72% ± 25%	Explore
kidney connecting tubule epithelial cell	4 studies	79% ± 22%	Explore
glycinergic amacrine cell	4 studies	26% ± 7%	Explore
lymphocyte	4 studies	71% ± 32%	Explore
neuroendocrine cell	4 studies	84% ± 6%	Explore
adventitial cell	4 studies	77% ± 17%	Explore
mucus secreting cell	4 studies	77% ± 35%	Explore
retina horizontal cell	4 studies	34% ± 10%	Explore
acinar cell	4 studies	80% ± 24%	Explore
muscle cell	4 studies	43% ± 23%	Explore
germinal center B cell	4 studies	86% ± 10%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	80% ± 16%	Explore
hepatocyte	4 studies	59% ± 35%	Explore
IgM plasma cell	4 studies	66% ± 21%	Explore
oligodendrocyte precursor cell	4 studies	44% ± 26%	Explore
group 3 innate lymphoid cell	4 studies	83% ± 8%	Explore
keratinocyte	4 studies	91% ± 6%	Explore
interneuron	4 studies	29% ± 7%	Explore
T-helper 1 cell	4 studies	90% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	74% ± 2%	Explore
central memory CD8-positive, alpha-beta T cell	4 studies	92% ± 8%	Explore
Langerhans cell	3 studies	66% ± 21%	Explore
squamous epithelial cell	3 studies	46% ± 29%	Explore
pancreatic D cell	3 studies	95% ± 7%	Explore
podocyte	3 studies	91% ± 7%	Explore
renal beta-intercalated cell	3 studies	98% ± 1%	Explore
neural crest cell	3 studies	96% ± 3%	Explore
paneth cell	3 studies	85% ± 12%	Explore
retinal bipolar neuron	3 studies	38% ± 22%	Explore
renal principal cell	3 studies	54% ± 25%	Explore
thymocyte	3 studies	99% ± 1%	Explore
extravillous trophoblast	3 studies	99% ± 1%	Explore
placental villous trophoblast	3 studies	99% ± 1%	Explore
common myeloid progenitor	3 studies	62% ± 34%	Explore
serous secreting cell	3 studies	77% ± 22%	Explore
tissue-resident macrophage	3 studies	68% ± 27%	Explore
follicular B cell	3 studies	95% ± 2%	Explore
intraepithelial lymphocyte	3 studies	86% ± 3%	Explore
GABAergic amacrine cell	3 studies	28% ± 9%	Explore
rod bipolar cell	3 studies	49% ± 7%	Explore
endothelial cell of sinusoid	3 studies	62% ± 30%	Explore
myoepithelial cell	3 studies	79% ± 25%	Explore
cholangiocyte	3 studies	47% ± 34%	Explore
luminal cell of prostate epithelium	3 studies	97% ± 3%	Explore
monocyte-derived dendritic cell	3 studies	79% ± 26%	Explore
retinal pigment epithelial cell	3 studies	39% ± 20%	Explore
pancreatic ductal cell	3 studies	93% ± 6%	Explore
granulocyte monocyte progenitor cell	3 studies	82% ± 23%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	99% ± 0%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	88% ± 10%	Explore
double-positive, alpha-beta thymocyte	3 studies	90% ± 2%	Explore
CD4-positive, alpha-beta cytotoxic T cell	3 studies	62% ± 16%	Explore
progenitor cell of mammary luminal epithelium	3 studies	70% ± 21%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	18 studies	74% ± 19%	Explore
peripheral blood	18 studies	78% ± 16%	Explore
intestine	15 studies	66% ± 28%	Explore
brain	11 studies	39% ± 21%	Explore
eye	10 studies	49% ± 21%	Explore
kidney	8 studies	66% ± 26%	Explore
bone marrow	7 studies	76% ± 26%	Explore
liver	6 studies	70% ± 24%	Explore
pancreas	5 studies	84% ± 19%	Explore
uterus	5 studies	87% ± 12%	Explore
lymph node	4 studies	84% ± 13%	Explore
placenta	4 studies	87% ± 18%	Explore
esophagus	4 studies	65% ± 29%	Explore
prostate	4 studies	87% ± 19%	Explore
skin	4 studies	79% ± 12%	Explore
breast	4 studies	75% ± 19%	Explore
heart	3 studies	48% ± 17%	Explore
adipose	3 studies	37% ± 16%	Explore
thymus	3 studies	78% ± 24%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	33966.17	1445 / 1445	100%	298.49	183 / 183
liver	100%	16819.86	226 / 226	100%	347.44	406 / 406
lung	100%	34180.20	578 / 578	100%	388.60	1155 / 1155
ovary	100%	77118.93	180 / 180	100%	736.98	430 / 430
pancreas	100%	27747.34	328 / 328	100%	377.34	178 / 178
prostate	100%	41397.97	245 / 245	100%	538.18	502 / 502
skin	100%	45955.80	1809 / 1809	100%	414.68	472 / 472
thymus	100%	30451.92	653 / 653	100%	521.61	605 / 605
uterus	100%	42249.58	170 / 170	100%	567.26	459 / 459
kidney	100%	28773.66	89 / 89	100%	347.94	900 / 901
breast	100%	51365.37	459 / 459	100%	400.13	1116 / 1118
stomach	100%	30229.51	359 / 359	100%	379.49	285 / 286
bladder	100%	39930.67	21 / 21	100%	436.25	502 / 504
adrenal gland	100%	28609.46	258 / 258	99%	281.39	228 / 230
intestine	100%	36071.27	966 / 966	99%	391.92	522 / 527
brain	99%	16001.53	2604 / 2642	100%	287.86	705 / 705
adipose	100%	51593.28	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	981.30	80 / 80
lymph node	0%	0	0 / 0	100%	872.60	29 / 29
spleen	100%	43259.90	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	414.00	45 / 45
ureter	0%	0	0 / 0	100%	307.95	1 / 1
blood vessel	100%	33994.25	1334 / 1335	0%	0	0 / 0
muscle	100%	25061.43	800 / 803	0%	0	0 / 0
heart	99%	21212.75	850 / 861	0%	0	0 / 0
peripheral blood	87%	24943.52	806 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_1901798	Biological process	positive regulation of signal transduction by p53 class mediator
GO_0006412	Biological process	translation
GO_0002181	Biological process	cytoplasmic translation
GO_0022626	Cellular component	cytosolic ribosome
GO_0070062	Cellular component	extracellular exosome
GO_0005654	Cellular component	nucleoplasm
GO_0005829	Cellular component	cytosol
GO_0045202	Cellular component	synapse
GO_0016020	Cellular component	membrane
GO_0022627	Cellular component	cytosolic small ribosomal subunit
GO_0005737	Cellular component	cytoplasm
GO_0097371	Molecular function	MDM2/MDM4 family protein binding
GO_0003735	Molecular function	structural constituent of ribosome
GO_1990948	Molecular function	ubiquitin ligase inhibitor activity
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

Gene name	RPS20
Protein name	Small ribosomal subunit protein uS10 (40S ribosomal protein S20) Ribosomal protein S20
Synonyms	hCG_40753
Description	FUNCTION: Component of the small ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . .
Accessions	G3XAN0 ENST00000676461.1 [P60866-1] ENST00000519807.5 [P60866-2] ENST00000676918.1 [P60866-1] A0A7P0S5H5 ENST00000521262.5 [P60866-1] P60866 ENST00000009589.8 [P60866-1] ENST00000519606.5 ENST00000518875.5 ENST00000524349.5 ENST00000523936.5 ENST00000618656.2 ENST00000678039.1 [P60866-1] ENST00000520627.1 E5RJX2 E5RIP1 ENST00000678683.1 [P60866-1]

RPS20 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review