Name | Number of supported studies | Average coverage | |
---|---|---|---|
classical monocyte | 6 studies | 21% ± 3% | |
dendritic cell | 5 studies | 33% ± 13% | |
conventional dendritic cell | 4 studies | 32% ± 5% | |
epithelial cell | 3 studies | 25% ± 6% |
Insufficient scRNA-seq data for expression of TRMT6 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 851.56 | 180 / 180 | 100% | 20.26 | 430 / 430 |
breast | 100% | 892.78 | 459 / 459 | 100% | 23.42 | 1117 / 1118 |
esophagus | 100% | 882.72 | 1443 / 1445 | 100% | 21.41 | 183 / 183 |
bladder | 100% | 955.86 | 21 / 21 | 100% | 26.85 | 503 / 504 |
stomach | 100% | 674.33 | 358 / 359 | 100% | 22.63 | 286 / 286 |
intestine | 100% | 832.00 | 966 / 966 | 100% | 23.21 | 525 / 527 |
prostate | 100% | 864.13 | 245 / 245 | 99% | 14.28 | 499 / 502 |
lung | 99% | 788.80 | 574 / 578 | 100% | 27.26 | 1154 / 1155 |
uterus | 99% | 864.05 | 169 / 170 | 100% | 27.84 | 458 / 459 |
skin | 100% | 1468.48 | 1809 / 1809 | 99% | 26.66 | 467 / 472 |
brain | 99% | 857.29 | 2612 / 2642 | 100% | 17.24 | 705 / 705 |
thymus | 100% | 782.91 | 652 / 653 | 99% | 14.78 | 599 / 605 |
adrenal gland | 100% | 1307.41 | 258 / 258 | 99% | 31.35 | 227 / 230 |
pancreas | 99% | 611.80 | 326 / 328 | 99% | 17.30 | 176 / 178 |
kidney | 100% | 771.19 | 89 / 89 | 97% | 12.28 | 871 / 901 |
liver | 99% | 437.72 | 224 / 226 | 94% | 11.55 | 381 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 29.11 | 29 / 29 |
spleen | 100% | 1068.14 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 24.11 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.22 | 1 / 1 |
adipose | 100% | 939.68 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 1411.94 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 813.94 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 95% | 660.92 | 814 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 858.02 | 853 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 85% | 9.20 | 68 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006397 | Biological process | mRNA processing |
GO_0030488 | Biological process | tRNA methylation |
GO_0031515 | Cellular component | tRNA (m1A) methyltransferase complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | TRMT6 |
Protein name | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 (mRNA methyladenosine-N(1)-methyltransferase non-catalytic subunit TRM6) (tRNA(m1A58)-methyltransferase subunit TRM6) (tRNA(m1A58)MTase subunit TRM6) |
Synonyms | KIAA1153 TRM6 CGI-09 |
Description | FUNCTION: Substrate-binding subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA . Together with the TRMT61A catalytic subunit, part of a mRNA N(1)-methyltransferase complex that mediates methylation of adenosine residues at the N(1) position of a small subset of mRNAs: N(1) methylation takes place in tRNA T-loop-like structures of mRNAs and is only present at low stoichiometries . . |
Accessions | Q9UJA5 ENST00000203001.7 [Q9UJA5-1] ENST00000453074.6 [Q9UJA5-4] |