RPS28 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	49 studies	92% ± 17%	Explore
endothelial cell	45 studies	76% ± 29%	Explore
macrophage	43 studies	82% ± 25%	Explore
natural killer cell	43 studies	90% ± 18%	Explore
T cell	40 studies	82% ± 25%	Explore
fibroblast	40 studies	83% ± 26%	Explore
CD8-positive, alpha-beta T cell	37 studies	93% ± 12%	Explore
pericyte	36 studies	81% ± 27%	Explore
CD4-positive, alpha-beta T cell	35 studies	92% ± 16%	Explore
conventional dendritic cell	30 studies	95% ± 12%	Explore
plasmacytoid dendritic cell	30 studies	97% ± 4%	Explore
plasma cell	28 studies	83% ± 24%	Explore
smooth muscle cell	28 studies	85% ± 23%	Explore
epithelial cell	27 studies	80% ± 28%	Explore
dendritic cell	26 studies	90% ± 19%	Explore
endothelial cell of lymphatic vessel	26 studies	86% ± 24%	Explore
regulatory T cell	26 studies	95% ± 9%	Explore
classical monocyte	25 studies	94% ± 8%	Explore
monocyte	24 studies	85% ± 21%	Explore
non-classical monocyte	24 studies	95% ± 9%	Explore
mast cell	23 studies	88% ± 15%	Explore
mature NK T cell	23 studies	90% ± 16%	Explore
gamma-delta T cell	21 studies	92% ± 15%	Explore
memory B cell	21 studies	98% ± 4%	Explore
basal cell	21 studies	86% ± 23%	Explore
connective tissue cell	19 studies	88% ± 21%	Explore
naive B cell	18 studies	97% ± 5%	Explore
mucosal invariant T cell	17 studies	94% ± 10%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	96% ± 11%	Explore
endothelial cell of artery	16 studies	87% ± 12%	Explore
capillary endothelial cell	16 studies	85% ± 12%	Explore
ciliated cell	15 studies	86% ± 11%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	91% ± 15%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	92% ± 11%	Explore
vein endothelial cell	15 studies	84% ± 23%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	95% ± 15%	Explore
neutrophil	14 studies	67% ± 25%	Explore
myeloid cell	14 studies	81% ± 28%	Explore
CD8-positive, alpha-beta memory T cell	13 studies	90% ± 21%	Explore
myofibroblast cell	13 studies	94% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	88% ± 19%	Explore
innate lymphoid cell	12 studies	96% ± 4%	Explore
plasmablast	12 studies	95% ± 5%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	90% ± 19%	Explore
secretory cell	12 studies	90% ± 22%	Explore
microglial cell	12 studies	64% ± 28%	Explore
goblet cell	12 studies	79% ± 23%	Explore
mesothelial cell	12 studies	83% ± 23%	Explore
endothelial cell of vascular tree	12 studies	85% ± 25%	Explore
astrocyte	11 studies	41% ± 21%	Explore
leukocyte	11 studies	85% ± 20%	Explore
T follicular helper cell	10 studies	98% ± 2%	Explore
erythrocyte	10 studies	74% ± 23%	Explore
progenitor cell	10 studies	92% ± 14%	Explore
type I pneumocyte	9 studies	75% ± 26%	Explore
type II pneumocyte	9 studies	82% ± 24%	Explore
IgG plasma cell	9 studies	87% ± 14%	Explore
hematopoietic stem cell	9 studies	91% ± 22%	Explore
club cell	8 studies	90% ± 17%	Explore
abnormal cell	8 studies	76% ± 31%	Explore
neuron	8 studies	66% ± 24%	Explore
enterocyte	8 studies	79% ± 20%	Explore
IgA plasma cell	8 studies	86% ± 20%	Explore
alveolar macrophage	7 studies	75% ± 33%	Explore
respiratory goblet cell	7 studies	78% ± 28%	Explore
platelet	7 studies	65% ± 24%	Explore
mononuclear phagocyte	7 studies	85% ± 23%	Explore
oligodendrocyte	7 studies	31% ± 10%	Explore
epithelial cell of proximal tubule	7 studies	87% ± 16%	Explore
oligodendrocyte precursor cell	7 studies	39% ± 27%	Explore
enteroendocrine cell	7 studies	90% ± 12%	Explore
transit amplifying cell	7 studies	78% ± 29%	Explore
retinal rod cell	7 studies	56% ± 24%	Explore
hematopoietic precursor cell	6 studies	82% ± 28%	Explore
glutamatergic neuron	6 studies	33% ± 14%	Explore
kidney loop of Henle epithelial cell	6 studies	88% ± 16%	Explore
renal alpha-intercalated cell	6 studies	97% ± 3%	Explore
intestinal crypt stem cell	6 studies	76% ± 33%	Explore
amacrine cell	6 studies	54% ± 22%	Explore
precursor B cell	6 studies	99% ± 2%	Explore
brush cell	6 studies	84% ± 16%	Explore
glial cell	6 studies	71% ± 26%	Explore
immature B cell	6 studies	99% ± 2%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	99% ± 2%	Explore
CD4-positive helper T cell	5 studies	96% ± 4%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	98% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	94% ± 5%	Explore
ionocyte	5 studies	94% ± 3%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	98% ± 1%	Explore
megakaryocyte	5 studies	82% ± 16%	Explore
erythroblast	5 studies	84% ± 11%	Explore
retinal ganglion cell	5 studies	73% ± 23%	Explore
OFF-bipolar cell	5 studies	64% ± 28%	Explore
ON-bipolar cell	5 studies	63% ± 28%	Explore
retinal cone cell	5 studies	66% ± 25%	Explore
lymphocyte	5 studies	85% ± 28%	Explore
T-helper 17 cell	5 studies	99% ± 1%	Explore
group 3 innate lymphoid cell	5 studies	96% ± 2%	Explore
Mueller cell	5 studies	63% ± 25%	Explore
double negative thymocyte	5 studies	99% ± 2%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	97% ± 5%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	100% ± 0%	Explore
granulocyte	5 studies	95% ± 6%	Explore
GABAergic neuron	5 studies	31% ± 7%	Explore
intermediate monocyte	5 studies	92% ± 10%	Explore
melanocyte	5 studies	79% ± 26%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	86% ± 19%	Explore
duct epithelial cell	4 studies	97% ± 1%	Explore
exhausted T cell	4 studies	95% ± 7%	Explore
precursor cell	4 studies	81% ± 31%	Explore
pancreatic A cell	4 studies	91% ± 12%	Explore
type B pancreatic cell	4 studies	90% ± 12%	Explore
cholangiocyte	4 studies	41% ± 34%	Explore
endothelial cell of sinusoid	4 studies	54% ± 29%	Explore
glomerular endothelial cell	4 studies	88% ± 9%	Explore
kidney connecting tubule epithelial cell	4 studies	94% ± 5%	Explore
podocyte	4 studies	94% ± 5%	Explore
GABAergic amacrine cell	4 studies	51% ± 23%	Explore
glycinergic amacrine cell	4 studies	50% ± 22%	Explore
pro-B cell	4 studies	99% ± 1%	Explore
neuroendocrine cell	4 studies	98% ± 2%	Explore
adventitial cell	4 studies	88% ± 14%	Explore
mucus secreting cell	4 studies	81% ± 32%	Explore
retina horizontal cell	4 studies	55% ± 25%	Explore
acinar cell	4 studies	85% ± 15%	Explore
muscle cell	4 studies	55% ± 20%	Explore
germinal center B cell	4 studies	98% ± 1%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	96% ± 6%	Explore
hepatocyte	4 studies	62% ± 37%	Explore
IgM plasma cell	4 studies	90% ± 9%	Explore
interneuron	4 studies	56% ± 23%	Explore
T-helper 1 cell	4 studies	100% ± 0%	Explore
deuterosomal cell	3 studies	93% ± 0%	Explore
pancreatic D cell	3 studies	96% ± 3%	Explore
hepatic stellate cell	3 studies	18% ± 1%	Explore
renal beta-intercalated cell	3 studies	98% ± 2%	Explore
neural crest cell	3 studies	100% ± 0%	Explore
paneth cell	3 studies	94% ± 8%	Explore
retinal bipolar neuron	3 studies	58% ± 28%	Explore
renal principal cell	3 studies	95% ± 3%	Explore
thymocyte	3 studies	100% ± 0%	Explore
extravillous trophoblast	3 studies	99% ± 1%	Explore
placental villous trophoblast	3 studies	100% ± 0%	Explore
Schwann cell	3 studies	71% ± 35%	Explore
serous secreting cell	3 studies	89% ± 10%	Explore
adipocyte	3 studies	18% ± 3%	Explore
tissue-resident macrophage	3 studies	72% ± 28%	Explore
follicular B cell	3 studies	98% ± 2%	Explore
intraepithelial lymphocyte	3 studies	97% ± 2%	Explore
rod bipolar cell	3 studies	76% ± 17%	Explore
myoepithelial cell	3 studies	99% ± 0%	Explore
inflammatory macrophage	3 studies	87% ± 17%	Explore
luminal cell of prostate epithelium	3 studies	100% ± 0%	Explore
retinal pigment epithelial cell	3 studies	59% ± 25%	Explore
pancreatic ductal cell	3 studies	85% ± 12%	Explore
granulocyte monocyte progenitor cell	3 studies	75% ± 34%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	100% ± 0%	Explore
keratinocyte	3 studies	97% ± 3%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	99% ± 1%	Explore
double-positive, alpha-beta thymocyte	3 studies	98% ± 1%	Explore
progenitor cell of mammary luminal epithelium	3 studies	100% ± 0%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	19 studies	90% ± 18%	Explore
lung	18 studies	87% ± 14%	Explore
intestine	13 studies	88% ± 15%	Explore
brain	12 studies	40% ± 21%	Explore
eye	10 studies	61% ± 24%	Explore
kidney	8 studies	83% ± 22%	Explore
liver	7 studies	63% ± 28%	Explore
bone marrow	6 studies	82% ± 24%	Explore
pancreas	5 studies	83% ± 18%	Explore
uterus	5 studies	92% ± 11%	Explore
lymph node	4 studies	99% ± 1%	Explore
placenta	4 studies	88% ± 19%	Explore
heart	4 studies	41% ± 17%	Explore
esophagus	4 studies	67% ± 26%	Explore
prostate	4 studies	90% ± 17%	Explore
breast	4 studies	96% ± 4%	Explore
adipose	3 studies	56% ± 31%	Explore
skin	3 studies	82% ± 23%	Explore
stomach	3 studies	68% ± 17%	Explore
thymus	3 studies	80% ± 28%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	100%	23478.02	180 / 180	100%	830.66	430 / 430
uterus	100%	14534.78	170 / 170	100%	479.73	459 / 459
esophagus	100%	14834.46	1444 / 1445	100%	383.23	183 / 183
thymus	100%	15063.19	652 / 653	100%	586.62	604 / 605
liver	100%	10479.96	226 / 226	100%	367.03	404 / 406
pancreas	100%	18192.41	328 / 328	99%	440.35	177 / 178
brain	100%	8622.60	2630 / 2642	100%	344.22	704 / 705
prostate	100%	17174.74	245 / 245	99%	749.39	499 / 502
skin	100%	23318.30	1809 / 1809	99%	475.06	469 / 472
stomach	100%	12888.57	359 / 359	99%	485.96	284 / 286
intestine	100%	13826.25	966 / 966	99%	550.60	523 / 527
adrenal gland	100%	14516.10	258 / 258	99%	381.75	228 / 230
bladder	100%	14489.38	21 / 21	99%	497.84	497 / 504
kidney	100%	12762.78	89 / 89	99%	337.99	888 / 901
breast	100%	17646.31	459 / 459	98%	359.30	1094 / 1118
lung	100%	13681.85	576 / 578	98%	331.10	1134 / 1155
eye	0%	0	0 / 0	100%	1119.52	80 / 80
lymph node	0%	0	0 / 0	100%	1040.16	29 / 29
spleen	100%	21143.47	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	458.37	45 / 45
ureter	0%	0	0 / 0	100%	383.71	1 / 1
adipose	100%	15845.08	1202 / 1204	0%	0	0 / 0
blood vessel	100%	10395.61	1330 / 1335	0%	0	0 / 0
heart	99%	9472.04	853 / 861	0%	0	0 / 0
muscle	99%	11327.97	792 / 803	0%	0	0 / 0
peripheral blood	97%	15103.58	899 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0000028	Biological process	ribosomal small subunit assembly
GO_0042254	Biological process	ribosome biogenesis
GO_0006412	Biological process	translation
GO_0042274	Biological process	ribosomal small subunit biogenesis
GO_0030490	Biological process	maturation of SSU-rRNA
GO_0006364	Biological process	rRNA processing
GO_0002181	Biological process	cytoplasmic translation
GO_0005730	Cellular component	nucleolus
GO_0098556	Cellular component	cytoplasmic side of rough endoplasmic reticulum membrane
GO_0022627	Cellular component	cytosolic small ribosomal subunit
GO_0005840	Cellular component	ribosome
GO_0032040	Cellular component	small-subunit processome
GO_0070062	Cellular component	extracellular exosome
GO_0005654	Cellular component	nucleoplasm
GO_0005829	Cellular component	cytosol
GO_0045202	Cellular component	synapse
GO_0015935	Cellular component	small ribosomal subunit
GO_0005737	Cellular component	cytoplasm
GO_0003735	Molecular function	structural constituent of ribosome
GO_0003723	Molecular function	RNA binding
GO_0005515	Molecular function	protein binding

Gene name	RPS28
Protein name	Small ribosomal subunit protein eS28 (40S ribosomal protein S28)
Synonyms	hCG_23961 hCG_26477
Description	FUNCTION: Component of the small ribosomal subunit . The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome . .
Accessions	ENST00000600659.3 B2R4R9 P62857

RPS28 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review