Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 18 studies | 29% ± 11% | |
fibroblast | 16 studies | 28% ± 10% | |
astrocyte | 15 studies | 30% ± 14% | |
glutamatergic neuron | 12 studies | 46% ± 24% | |
smooth muscle cell | 12 studies | 22% ± 6% | |
pericyte | 11 studies | 23% ± 10% | |
oligodendrocyte precursor cell | 11 studies | 33% ± 12% | |
oligodendrocyte | 11 studies | 32% ± 11% | |
GABAergic neuron | 10 studies | 42% ± 23% | |
microglial cell | 10 studies | 29% ± 9% | |
adipocyte | 9 studies | 37% ± 10% | |
neuron | 7 studies | 38% ± 15% | |
epithelial cell | 7 studies | 29% ± 12% | |
macrophage | 7 studies | 29% ± 10% | |
interneuron | 6 studies | 52% ± 25% | |
amacrine cell | 6 studies | 33% ± 4% | |
retina horizontal cell | 6 studies | 55% ± 13% | |
endothelial cell of lymphatic vessel | 6 studies | 26% ± 8% | |
retinal cone cell | 5 studies | 32% ± 13% | |
retinal rod cell | 5 studies | 24% ± 12% | |
B cell | 5 studies | 21% ± 4% | |
cardiac muscle cell | 5 studies | 30% ± 7% | |
type I pneumocyte | 5 studies | 23% ± 4% | |
connective tissue cell | 5 studies | 24% ± 6% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 4 studies | 19% ± 2% | |
granule cell | 4 studies | 40% ± 11% | |
retinal bipolar neuron | 4 studies | 25% ± 6% | |
retinal pigment epithelial cell | 4 studies | 32% ± 16% | |
dendritic cell | 4 studies | 22% ± 4% | |
mast cell | 4 studies | 19% ± 3% | |
lymphocyte | 4 studies | 20% ± 5% | |
myeloid cell | 4 studies | 18% ± 1% | |
muscle cell | 4 studies | 31% ± 11% | |
club cell | 4 studies | 21% ± 8% | |
basal cell | 4 studies | 34% ± 15% | |
naive B cell | 3 studies | 21% ± 7% | |
hematopoietic precursor cell | 3 studies | 21% ± 4% | |
neural crest cell | 3 studies | 18% ± 2% | |
GABAergic interneuron | 3 studies | 36% ± 4% | |
glial cell | 3 studies | 29% ± 4% | |
retinal ganglion cell | 3 studies | 38% ± 10% | |
mesothelial cell | 3 studies | 25% ± 5% | |
vein endothelial cell | 3 studies | 33% ± 22% | |
ciliated cell | 3 studies | 20% ± 2% | |
GABAergic amacrine cell | 3 studies | 33% ± 7% | |
ON-bipolar cell | 3 studies | 26% ± 7% | |
glycinergic amacrine cell | 3 studies | 26% ± 1% | |
rod bipolar cell | 3 studies | 21% ± 4% | |
erythroblast | 3 studies | 32% ± 9% | |
abnormal cell | 3 studies | 38% ± 11% | |
type II pneumocyte | 3 studies | 23% ± 6% | |
neural progenitor cell | 3 studies | 25% ± 9% | |
ependymal cell | 3 studies | 44% ± 9% | |
granulocyte monocyte progenitor cell | 3 studies | 24% ± 8% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 34% ± 8% | |
leukocyte | 3 studies | 23% ± 2% | |
T cell | 3 studies | 19% ± 1% | |
alveolar macrophage | 3 studies | 19% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1119.45 | 180 / 180 | 100% | 12.58 | 430 / 430 |
breast | 100% | 1182.82 | 459 / 459 | 100% | 13.66 | 1115 / 1118 |
uterus | 100% | 1142.39 | 170 / 170 | 100% | 16.59 | 457 / 459 |
brain | 100% | 1338.49 | 2631 / 2642 | 100% | 13.35 | 704 / 705 |
prostate | 100% | 848.58 | 244 / 245 | 99% | 8.19 | 498 / 502 |
adrenal gland | 100% | 1454.73 | 258 / 258 | 99% | 12.06 | 227 / 230 |
skin | 100% | 1093.53 | 1808 / 1809 | 99% | 13.90 | 465 / 472 |
bladder | 100% | 1214.67 | 21 / 21 | 98% | 12.14 | 494 / 504 |
thymus | 100% | 739.60 | 652 / 653 | 98% | 7.45 | 592 / 605 |
lung | 99% | 812.69 | 574 / 578 | 98% | 12.73 | 1133 / 1155 |
pancreas | 99% | 748.66 | 326 / 328 | 97% | 7.20 | 173 / 178 |
stomach | 100% | 633.08 | 358 / 359 | 97% | 10.28 | 276 / 286 |
intestine | 99% | 819.68 | 955 / 966 | 97% | 11.92 | 511 / 527 |
esophagus | 100% | 820.71 | 1439 / 1445 | 93% | 9.30 | 171 / 183 |
kidney | 100% | 702.07 | 89 / 89 | 92% | 6.18 | 833 / 901 |
liver | 87% | 393.50 | 197 / 226 | 89% | 5.94 | 362 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 15.47 | 29 / 29 |
spleen | 100% | 677.14 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.12 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.03 | 1 / 1 |
adipose | 100% | 1150.52 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1330.01 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1989.45 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 781.43 | 815 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 86% | 5.86 | 69 / 80 |
peripheral blood | 36% | 498.26 | 331 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | CMSS1 |
Protein name | Protein CMSS1 (Cms1 ribosomal small subunit homolog) Cms1 ribosomal small subunit homolog |
Synonyms | C3orf26 |
Description | |
Accessions | ENST00000491299.5 ENST00000478909.5 ENST00000489081.5 [Q9BQ75-2] C9IY68 C9J384 ENST00000497345.1 F8WC72 ENST00000463526.1 H7C515 Q9BQ75 ENST00000421999.8 [Q9BQ75-1] |