Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 25% ± 8% | |
GABAergic neuron | 3 studies | 21% ± 4% | |
glutamatergic neuron | 3 studies | 28% ± 2% | |
dendritic cell | 3 studies | 18% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 20% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5097.00 | 1445 / 1445 | 100% | 34.58 | 183 / 183 |
ovary | 100% | 3066.25 | 180 / 180 | 100% | 25.37 | 430 / 430 |
prostate | 100% | 4126.55 | 245 / 245 | 100% | 35.26 | 502 / 502 |
stomach | 100% | 3512.62 | 359 / 359 | 100% | 33.72 | 286 / 286 |
thymus | 100% | 3886.80 | 653 / 653 | 100% | 36.12 | 605 / 605 |
lung | 100% | 3111.34 | 577 / 578 | 100% | 30.29 | 1155 / 1155 |
breast | 100% | 4152.86 | 459 / 459 | 100% | 35.45 | 1116 / 1118 |
intestine | 100% | 4316.67 | 966 / 966 | 100% | 34.54 | 526 / 527 |
skin | 100% | 4372.09 | 1809 / 1809 | 100% | 44.46 | 471 / 472 |
uterus | 100% | 3687.09 | 170 / 170 | 100% | 39.24 | 458 / 459 |
kidney | 100% | 3430.98 | 89 / 89 | 100% | 36.12 | 899 / 901 |
pancreas | 100% | 2336.65 | 327 / 328 | 100% | 25.89 | 178 / 178 |
bladder | 100% | 4405.86 | 21 / 21 | 99% | 34.62 | 501 / 504 |
brain | 99% | 2766.31 | 2625 / 2642 | 100% | 40.57 | 705 / 705 |
liver | 100% | 3263.10 | 226 / 226 | 99% | 23.43 | 403 / 406 |
adrenal gland | 100% | 6203.38 | 258 / 258 | 99% | 25.29 | 227 / 230 |
adipose | 100% | 4117.27 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 42.43 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 54.04 | 29 / 29 |
muscle | 100% | 5125.23 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 5375.62 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 38.19 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.09 | 1 / 1 |
blood vessel | 100% | 3843.75 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 3786.51 | 849 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 85% | 2303.73 | 787 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0090646 | Biological process | mitochondrial tRNA processing |
GO_0042780 | Biological process | tRNA 3'-end processing |
GO_1990180 | Biological process | mitochondrial tRNA 3'-end processing |
GO_0016078 | Biological process | tRNA decay |
GO_0005739 | Cellular component | mitochondrion |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0042645 | Cellular component | mitochondrial nucleoid |
GO_0005634 | Cellular component | nucleus |
GO_0004521 | Molecular function | RNA endonuclease activity |
GO_0004549 | Molecular function | tRNA-specific ribonuclease activity |
GO_0042781 | Molecular function | 3'-tRNA processing endoribonuclease activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | ELAC2 |
Protein name | ElaC-like protein 2 isoform 2 ribonuclease Z (EC 3.1.26.11) Zinc phosphodiesterase ELAC protein 2 (EC 3.1.26.11) (ElaC homolog protein 2) (Ribonuclease Z 2) (tRNA 3 endonuclease 2) (tRNase Z 2) Zinc phosphodiesterase ELAC protein 2 (EC 3.1.26.11) (ElaC homolog protein 2) (Heredity prostate cancer protein 2) (Ribonuclease Z 2) (RNase Z 2) (tRNA 3 endonuclease 2) (tRNase Z 2) ElaC ribonuclease Z 2 |
Synonyms | HPC2 hCG_29734 |
Description | FUNCTION: Zinc phosphodiesterase, which displays mitochondrial tRNA 3'-processing endonuclease activity. Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA . Associates with mitochondrial DNA complexes at the nucleoids to initiate RNA processing and ribosome assembly . . |
Accessions | ENST00000584650.5 ENST00000476042.1 ENST00000581499.6 ENST00000609101.5 ENST00000578071.1 A0A0S2Z5M8 ENST00000583371.5 ENST00000338034.9 [Q9BQ52-1] ENST00000395962.6 ENST00000609757.5 A0A0S2Z5J8 ENST00000426905.7 [Q9BQ52-4] ENST00000580504.5 V9GYU5 V9GZ72 J3QLK4 J3QRS2 Q9BQ52 E7ES68 J3QL08 H7C2I4 G5E9D5 J3QQT1 V9GYS7 ENST00000446899.5 |