ZCCHC24 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte	17 studies	38% ± 18%	Explore
oligodendrocyte precursor cell	16 studies	49% ± 21%	Explore
fibroblast	13 studies	21% ± 7%	Explore
endothelial cell	9 studies	27% ± 9%	Explore
astrocyte	8 studies	24% ± 10%	Explore
adipocyte	5 studies	19% ± 2%	Explore
macrophage	3 studies	26% ± 5%	Explore
pericyte	3 studies	20% ± 1%	Explore
connective tissue cell	3 studies	20% ± 1%	Explore
Schwann cell	3 studies	35% ± 16%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	7 studies	30% ± 14%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	10407.59	2623 / 2642	100%	162.49	703 / 705
prostate	100%	7141.83	244 / 245	98%	28.29	491 / 502
breast	100%	7395.89	459 / 459	88%	25.68	986 / 1118
thymus	98%	4328.06	643 / 653	86%	18.39	523 / 605
skin	83%	3812.66	1510 / 1809	97%	65.19	457 / 472
liver	96%	3532.08	216 / 226	83%	15.49	337 / 406
lung	99%	5032.96	574 / 578	79%	15.85	913 / 1155
ovary	100%	5421.09	180 / 180	59%	10.84	255 / 430
stomach	78%	4619.88	281 / 359	79%	21.03	227 / 286
intestine	89%	8992.62	859 / 966	68%	14.22	358 / 527
esophagus	85%	7543.07	1223 / 1445	69%	13.13	127 / 183
bladder	100%	9280.52	21 / 21	53%	10.43	269 / 504
uterus	99%	9281.06	168 / 170	47%	16.73	218 / 459
adrenal gland	83%	2225.36	214 / 258	53%	7.56	122 / 230
pancreas	20%	375.27	64 / 328	91%	31.50	162 / 178
kidney	46%	1213.04	41 / 89	61%	10.14	549 / 901
adipose	100%	8671.41	1204 / 1204	0%	0	0 / 0
blood vessel	100%	7960.07	1334 / 1335	0%	0	0 / 0
muscle	100%	7362.44	801 / 803	0%	0	0 / 0
heart	97%	4776.90	833 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	95%	22.49	76 / 80
spleen	85%	2110.24	204 / 241	0%	0	0 / 0
lymph node	0%	0	0 / 0	48%	5.05	14 / 29
tonsil	0%	0	0 / 0	40%	4.75	18 / 45
peripheral blood	0%	1.85	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1