GPATCH1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal cone cell	5 studies	41% ± 16%	Explore
GABAergic neuron	3 studies	20% ± 5%	Explore
glutamatergic neuron	3 studies	25% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	18% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	950.44	459 / 459	100%	13.85	1118 / 1118
esophagus	100%	740.84	1445 / 1445	100%	11.12	183 / 183
intestine	100%	868.81	966 / 966	100%	10.41	527 / 527
prostate	100%	968.92	245 / 245	100%	9.79	502 / 502
stomach	100%	617.51	359 / 359	100%	10.46	286 / 286
uterus	100%	1003.69	170 / 170	100%	13.48	459 / 459
thymus	100%	899.30	653 / 653	100%	10.95	604 / 605
bladder	100%	873.43	21 / 21	100%	10.92	503 / 504
ovary	100%	1044.58	180 / 180	100%	10.20	429 / 430
kidney	100%	661.27	89 / 89	100%	8.72	898 / 901
brain	100%	678.47	2633 / 2642	100%	9.72	705 / 705
skin	100%	994.68	1809 / 1809	100%	10.34	470 / 472
adrenal gland	100%	639.55	258 / 258	100%	8.26	229 / 230
lung	99%	632.80	575 / 578	100%	10.22	1152 / 1155
pancreas	100%	441.86	327 / 328	99%	9.80	177 / 178
liver	100%	469.85	226 / 226	99%	6.88	400 / 406
adipose	100%	764.97	1204 / 1204	0%	0	0 / 0
blood vessel	100%	805.87	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	8.80	29 / 29
spleen	100%	828.54	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	11.79	45 / 45
ureter	0%	0	0 / 0	100%	5.25	1 / 1
muscle	99%	484.34	798 / 803	0%	0	0 / 0
heart	99%	435.45	849 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	98%	7.55	78 / 80
peripheral blood	90%	436.02	837 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0