Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 26% ± 9% | |
astrocyte | 7 studies | 26% ± 10% | |
oligodendrocyte precursor cell | 6 studies | 29% ± 12% | |
macrophage | 5 studies | 26% ± 3% | |
microglial cell | 5 studies | 23% ± 6% | |
epithelial cell | 5 studies | 28% ± 9% | |
interneuron | 4 studies | 27% ± 17% | |
GABAergic neuron | 4 studies | 30% ± 13% | |
oligodendrocyte | 4 studies | 23% ± 7% | |
ciliated cell | 3 studies | 23% ± 5% | |
glutamatergic neuron | 3 studies | 38% ± 10% | |
endothelial cell of lymphatic vessel | 3 studies | 22% ± 5% | |
fibroblast | 3 studies | 23% ± 7% | |
goblet cell | 3 studies | 29% ± 15% | |
transit amplifying cell | 3 studies | 27% ± 12% | |
neuron | 3 studies | 26% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 28% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 2777.90 | 21 / 21 | 100% | 18.46 | 504 / 504 |
esophagus | 100% | 2325.34 | 1445 / 1445 | 100% | 22.58 | 183 / 183 |
ovary | 100% | 4048.95 | 180 / 180 | 100% | 24.72 | 430 / 430 |
prostate | 100% | 3329.98 | 245 / 245 | 100% | 17.62 | 502 / 502 |
skin | 100% | 2984.78 | 1809 / 1809 | 100% | 28.83 | 472 / 472 |
stomach | 100% | 1798.41 | 359 / 359 | 100% | 17.50 | 286 / 286 |
uterus | 100% | 4011.94 | 170 / 170 | 100% | 22.21 | 459 / 459 |
intestine | 100% | 2495.30 | 966 / 966 | 100% | 16.56 | 526 / 527 |
thymus | 100% | 3544.26 | 653 / 653 | 100% | 21.81 | 603 / 605 |
lung | 100% | 2081.13 | 576 / 578 | 100% | 19.95 | 1154 / 1155 |
breast | 100% | 2969.05 | 459 / 459 | 100% | 20.88 | 1113 / 1118 |
brain | 99% | 1610.83 | 2621 / 2642 | 100% | 29.28 | 705 / 705 |
pancreas | 100% | 1632.12 | 328 / 328 | 99% | 15.46 | 176 / 178 |
kidney | 100% | 2015.12 | 89 / 89 | 98% | 16.67 | 886 / 901 |
adrenal gland | 100% | 2080.13 | 258 / 258 | 97% | 16.93 | 224 / 230 |
liver | 100% | 1217.12 | 226 / 226 | 95% | 11.24 | 385 / 406 |
adipose | 100% | 2358.09 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2211.48 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 24.77 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 19.51 | 29 / 29 |
spleen | 100% | 3947.82 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.01 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.05 | 1 / 1 |
heart | 99% | 1337.63 | 854 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 971.53 | 788 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 87% | 1260.67 | 807 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0048667 | Biological process | cell morphogenesis involved in neuron differentiation |
GO_0001764 | Biological process | neuron migration |
GO_2000766 | Biological process | negative regulation of cytoplasmic translation |
GO_0001701 | Biological process | in utero embryonic development |
GO_0005737 | Cellular component | cytoplasm |
GO_1990715 | Molecular function | mRNA CDS binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | UNK |
Protein name | Unk zinc finger RING finger protein unkempt homolog (Zinc finger CCCH domain-containing protein 5) |
Synonyms | ZC3H5 ZC3HDC5 KIAA1753 |
Description | FUNCTION: Sequence-specific RNA-binding protein which plays an important role in the establishment and maintenance of the early morphology of cortical neurons during embryonic development. Acts as a translation repressor and controls a translationally regulated cell morphology program to ensure proper structuring of the nervous system. Translational control depends on recognition of its binding element within target mRNAs which consists of a mandatory UAG trimer upstream of a U/A-rich motif. Associated with polysomes . . |
Accessions | ENST00000586217.1 K7EMB1 K7EQJ1 K7EIZ1 ENST00000587501.1 ENST00000592629.1 K7ELF5 K7EQ93 ENST00000587258.1 Q9C0B0 ENST00000589666.6 ENST00000586527.1 |