Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 8 studies | 39% ± 26% | |
| oligodendrocyte | 6 studies | 26% ± 8% | |
| endothelial cell | 5 studies | 24% ± 5% | |
| GABAergic neuron | 5 studies | 47% ± 21% | |
| astrocyte | 5 studies | 31% ± 12% | |
| natural killer cell | 5 studies | 17% ± 1% | |
| interneuron | 5 studies | 42% ± 24% | |
| oligodendrocyte precursor cell | 4 studies | 26% ± 8% | |
| B cell | 3 studies | 19% ± 2% | |
| CD16-positive, CD56-dim natural killer cell, human | 3 studies | 16% ± 1% | |
| CD4-positive, alpha-beta T cell | 3 studies | 19% ± 1% | |
| effector memory CD8-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
| naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 18% ± 1% | |
| naive thymus-derived CD8-positive, alpha-beta T cell | 3 studies | 19% ± 2% | |
| GABAergic interneuron | 3 studies | 16% ± 1% | |
| epithelial cell | 3 studies | 32% ± 8% | |
| dendritic cell | 3 studies | 26% ± 7% | |
| CD8-positive, alpha-beta memory T cell | 3 studies | 16% ± 1% | |
| gamma-delta T cell | 3 studies | 24% ± 11% | |
| neuron | 3 studies | 23% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 779.73 | 1445 / 1445 | 100% | 15.94 | 183 / 183 |
| ovary | 100% | 1046.51 | 180 / 180 | 100% | 17.28 | 430 / 430 |
| breast | 100% | 967.47 | 459 / 459 | 100% | 23.40 | 1117 / 1118 |
| lung | 100% | 760.48 | 576 / 578 | 100% | 14.63 | 1155 / 1155 |
| prostate | 100% | 745.98 | 245 / 245 | 100% | 12.17 | 500 / 502 |
| brain | 100% | 556.80 | 2629 / 2642 | 100% | 13.45 | 705 / 705 |
| stomach | 100% | 626.15 | 359 / 359 | 99% | 14.29 | 282 / 286 |
| bladder | 100% | 888.52 | 21 / 21 | 98% | 12.01 | 496 / 504 |
| thymus | 100% | 873.32 | 653 / 653 | 98% | 12.16 | 595 / 605 |
| pancreas | 100% | 535.38 | 328 / 328 | 98% | 9.58 | 175 / 178 |
| intestine | 100% | 789.27 | 966 / 966 | 98% | 13.47 | 518 / 527 |
| uterus | 100% | 972.26 | 170 / 170 | 98% | 11.57 | 451 / 459 |
| adrenal gland | 100% | 851.90 | 258 / 258 | 95% | 9.37 | 218 / 230 |
| kidney | 100% | 546.93 | 89 / 89 | 94% | 8.97 | 851 / 901 |
| skin | 100% | 951.74 | 1809 / 1809 | 92% | 13.57 | 434 / 472 |
| liver | 100% | 483.63 | 226 / 226 | 90% | 6.79 | 364 / 406 |
| adipose | 100% | 1011.99 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 779.15 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 11.80 | 29 / 29 |
| spleen | 100% | 885.52 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 11.08 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 7.45 | 1 / 1 |
| muscle | 99% | 515.24 | 798 / 803 | 0% | 0 | 0 / 0 |
| heart | 99% | 510.19 | 851 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 75% | 8.97 | 60 / 80 |
| peripheral blood | 67% | 491.44 | 624 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0000480 | Biological process | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| GO_0005730 | Cellular component | nucleolus |
| GO_0032040 | Cellular component | small-subunit processome |
| GO_0070181 | Molecular function | small ribosomal subunit rRNA binding |
| GO_0003730 | Molecular function | mRNA 3'-UTR binding |
| GO_0048027 | Molecular function | mRNA 5'-UTR binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | UTP23 |
| Protein name | UTP23 small subunit processome component rRNA-processing protein UTP23 homolog Chromosome 8 open reading frame 53, isoform CRA_c (UTP23 small subunit processome component) |
| Synonyms | hCG_1640093 C8orf53 |
| Description | FUNCTION: Involved in rRNA-processing and ribosome biogenesis. . FUNCTION: Involved in rRNA-processing and ribosome biogenesis. . |
| Accessions | E5RIM0 ENST00000517820.1 Q9BRU9 E5RG01 E5RGP0 E5RH13 G3XAM4 ENST00000309822.7 [Q9BRU9-1] ENST00000521071.1 E5RIC4 ENST00000521703.5 ENST00000517814.1 ENST00000520733.5 ENST00000524128.1 |