Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 19 studies | 87% ± 19% | |
peripheral blood | 18 studies | 93% ± 8% | |
intestine | 14 studies | 87% ± 24% | |
brain | 12 studies | 43% ± 25% | |
eye | 10 studies | 72% ± 19% | |
kidney | 8 studies | 85% ± 21% | |
liver | 7 studies | 73% ± 22% | |
bone marrow | 6 studies | 79% ± 28% | |
pancreas | 5 studies | 85% ± 20% | |
heart | 5 studies | 43% ± 20% | |
uterus | 5 studies | 92% ± 12% | |
lymph node | 4 studies | 98% ± 2% | |
placenta | 4 studies | 86% ± 25% | |
esophagus | 4 studies | 81% ± 23% | |
prostate | 4 studies | 94% ± 10% | |
skin | 4 studies | 89% ± 15% | |
breast | 4 studies | 98% ± 3% | |
adipose | 3 studies | 58% ± 28% | |
stomach | 3 studies | 65% ± 20% | |
thymus | 3 studies | 76% ± 33% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 17169.13 | 1445 / 1445 | 100% | 729.78 | 183 / 183 |
ovary | 100% | 34157.58 | 180 / 180 | 100% | 1864.95 | 430 / 430 |
pancreas | 100% | 20194.04 | 328 / 328 | 100% | 619.80 | 178 / 178 |
intestine | 100% | 16889.46 | 966 / 966 | 100% | 784.23 | 526 / 527 |
prostate | 100% | 18575.02 | 245 / 245 | 100% | 1077.53 | 501 / 502 |
thymus | 100% | 15853.90 | 653 / 653 | 100% | 817.36 | 603 / 605 |
skin | 100% | 23705.36 | 1809 / 1809 | 100% | 618.43 | 470 / 472 |
uterus | 100% | 17109.35 | 170 / 170 | 100% | 758.07 | 457 / 459 |
lung | 100% | 14459.06 | 576 / 578 | 99% | 689.95 | 1149 / 1155 |
breast | 100% | 20468.91 | 459 / 459 | 99% | 670.92 | 1105 / 1118 |
bladder | 100% | 16766.29 | 21 / 21 | 99% | 670.33 | 498 / 504 |
brain | 99% | 7657.09 | 2618 / 2642 | 100% | 599.90 | 703 / 705 |
stomach | 100% | 14532.44 | 359 / 359 | 99% | 764.14 | 282 / 286 |
kidney | 100% | 13395.42 | 89 / 89 | 98% | 580.20 | 886 / 901 |
liver | 100% | 8364.98 | 226 / 226 | 98% | 410.66 | 398 / 406 |
adrenal gland | 100% | 17160.74 | 258 / 258 | 95% | 539.33 | 219 / 230 |
eye | 0% | 0 | 0 / 0 | 100% | 975.56 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 1145.64 | 29 / 29 |
spleen | 100% | 16796.98 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 704.29 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 525.61 | 1 / 1 |
blood vessel | 100% | 14833.72 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 17192.97 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 13240.36 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 8880.54 | 837 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 85% | 11146.35 | 788 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0002181 | Biological process | cytoplasmic translation |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0022625 | Cellular component | cytosolic large ribosomal subunit |
GO_0005737 | Cellular component | cytoplasm |
GO_0003730 | Molecular function | mRNA 3'-UTR binding |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0048027 | Molecular function | mRNA 5'-UTR binding |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPL41 |
Protein name | 60S ribosomal protein L41 Small ribosomal subunit protein eS32 (60S ribosomal protein L41) (HG12) (Large ribosomal subunit protein eL41) |
Synonyms | |
Description | FUNCTION: Component of the small ribosomal subunit (Ref.8) (Probable). The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell . Interacts with the beta subunit of protein kinase CKII and stimulates phosphorylation of DNA topoisomerase II alpha by CKII . . |
Accessions | ENST00000501597.3 A0A024RB15 ENST00000546591.6 ENST00000617112 P62945 |