Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 23% ± 4% | |
epithelial cell | 4 studies | 39% ± 14% | |
fibroblast | 4 studies | 19% ± 3% | |
ciliated cell | 4 studies | 24% ± 11% | |
pericyte | 3 studies | 17% ± 1% | |
basal cell | 3 studies | 24% ± 7% | |
GABAergic neuron | 3 studies | 23% ± 4% | |
glutamatergic neuron | 3 studies | 30% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1880.42 | 1445 / 1445 | 100% | 41.87 | 183 / 183 |
brain | 100% | 1396.61 | 2639 / 2642 | 100% | 68.48 | 705 / 705 |
lung | 100% | 1395.97 | 577 / 578 | 100% | 52.89 | 1155 / 1155 |
prostate | 100% | 1698.64 | 245 / 245 | 100% | 63.82 | 501 / 502 |
breast | 100% | 1649.80 | 459 / 459 | 100% | 72.38 | 1115 / 1118 |
thymus | 100% | 1766.29 | 653 / 653 | 100% | 73.07 | 603 / 605 |
uterus | 100% | 1869.92 | 170 / 170 | 100% | 68.00 | 457 / 459 |
intestine | 100% | 1672.79 | 966 / 966 | 99% | 45.00 | 524 / 527 |
stomach | 100% | 1363.25 | 359 / 359 | 99% | 40.72 | 284 / 286 |
bladder | 100% | 1842.57 | 21 / 21 | 99% | 49.39 | 499 / 504 |
kidney | 100% | 1461.02 | 89 / 89 | 99% | 51.37 | 891 / 901 |
ovary | 100% | 1883.81 | 180 / 180 | 99% | 36.76 | 425 / 430 |
skin | 100% | 2295.41 | 1809 / 1809 | 99% | 64.23 | 466 / 472 |
liver | 100% | 750.50 | 226 / 226 | 98% | 29.88 | 397 / 406 |
pancreas | 97% | 875.86 | 319 / 328 | 100% | 48.77 | 178 / 178 |
adrenal gland | 100% | 2373.11 | 258 / 258 | 95% | 43.37 | 218 / 230 |
adipose | 100% | 1554.62 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1729.71 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 90.21 | 29 / 29 |
muscle | 100% | 1448.63 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1656.42 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 68.56 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 28.97 | 1 / 1 |
heart | 99% | 1255.21 | 852 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 43.09 | 77 / 80 |
peripheral blood | 92% | 1669.29 | 851 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000398 | Biological process | mRNA splicing, via spliceosome |
GO_0005813 | Cellular component | centrosome |
GO_0001527 | Cellular component | microfibril |
GO_0005684 | Cellular component | U2-type spliceosomal complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0071005 | Cellular component | U2-type precatalytic spliceosome |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | MFAP1 |
Protein name | Microfibrillar-associated protein 1 (Spliceosome B complex protein MFAP1) |
Synonyms | |
Description | FUNCTION: Involved in pre-mRNA splicing as a component of the spliceosome. . |
Accessions | P55081 ENST00000267812.4 |