Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 19 studies | 50% ± 15% | |
glutamatergic neuron | 11 studies | 47% ± 25% | |
oligodendrocyte | 11 studies | 24% ± 10% | |
astrocyte | 10 studies | 34% ± 17% | |
retinal cone cell | 9 studies | 59% ± 21% | |
oligodendrocyte precursor cell | 9 studies | 30% ± 13% | |
GABAergic neuron | 8 studies | 41% ± 22% | |
neuron | 6 studies | 30% ± 8% | |
interneuron | 6 studies | 46% ± 23% | |
amacrine cell | 6 studies | 32% ± 13% | |
endothelial cell | 5 studies | 32% ± 14% | |
retinal ganglion cell | 5 studies | 39% ± 19% | |
epithelial cell | 5 studies | 22% ± 1% | |
retinal bipolar neuron | 4 studies | 24% ± 8% | |
retina horizontal cell | 4 studies | 25% ± 9% | |
type B pancreatic cell | 3 studies | 40% ± 18% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 19% ± 3% | |
GABAergic interneuron | 3 studies | 29% ± 4% | |
granule cell | 3 studies | 29% ± 6% | |
lymphocyte | 3 studies | 21% ± 4% | |
rod bipolar cell | 3 studies | 26% ± 5% | |
ependymal cell | 3 studies | 51% ± 16% | |
gamma-delta T cell | 3 studies | 20% ± 2% | |
adipocyte | 3 studies | 16% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3519.64 | 2639 / 2642 | 100% | 27.36 | 705 / 705 |
thymus | 100% | 2318.77 | 653 / 653 | 99% | 14.48 | 600 / 605 |
prostate | 99% | 1690.90 | 243 / 245 | 100% | 13.30 | 501 / 502 |
kidney | 99% | 1426.38 | 88 / 89 | 98% | 17.21 | 882 / 901 |
breast | 98% | 1044.88 | 450 / 459 | 98% | 13.71 | 1101 / 1118 |
adrenal gland | 98% | 1965.31 | 253 / 258 | 98% | 25.44 | 226 / 230 |
lung | 94% | 1169.65 | 543 / 578 | 93% | 8.45 | 1076 / 1155 |
ovary | 100% | 2204.82 | 180 / 180 | 85% | 5.77 | 366 / 430 |
bladder | 100% | 1542.10 | 21 / 21 | 84% | 6.17 | 424 / 504 |
intestine | 99% | 1357.32 | 961 / 966 | 84% | 6.17 | 443 / 527 |
uterus | 99% | 1729.78 | 168 / 170 | 84% | 7.50 | 384 / 459 |
pancreas | 81% | 579.00 | 267 / 328 | 98% | 11.19 | 175 / 178 |
stomach | 91% | 874.56 | 328 / 359 | 87% | 6.23 | 250 / 286 |
esophagus | 89% | 1132.28 | 1286 / 1445 | 88% | 7.21 | 161 / 183 |
skin | 88% | 873.64 | 1584 / 1809 | 86% | 8.88 | 405 / 472 |
liver | 45% | 248.65 | 101 / 226 | 65% | 4.11 | 262 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 13.08 | 29 / 29 |
spleen | 100% | 1776.56 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1265.16 | 1321 / 1335 | 0% | 0 | 0 / 0 |
muscle | 97% | 1144.91 | 780 / 803 | 0% | 0 | 0 / 0 |
adipose | 96% | 929.31 | 1160 / 1204 | 0% | 0 | 0 / 0 |
heart | 91% | 1233.17 | 784 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 84% | 7.16 | 38 / 45 |
eye | 0% | 0 | 0 / 0 | 40% | 2.79 | 32 / 80 |
peripheral blood | 27% | 612.31 | 251 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0000209 | Biological process | protein polyubiquitination |
GO_0005737 | Cellular component | cytoplasm |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
GO_0031593 | Molecular function | polyubiquitin modification-dependent protein binding |
GO_0019902 | Molecular function | phosphatase binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | DZIP3 |
Protein name | DAZ interacting zinc finger protein 3 E3 ubiquitin-protein ligase DZIP3 (EC 2.3.2.27) (DAZ-interacting protein 3) (RING-type E3 ubiquitin transferase DZIP3) (RNA-binding ubiquitin ligase of 138 kDa) (hRUL138) RING-type E3 ubiquitin transferase (EC 2.3.2.27) |
Synonyms | KIAA0675 |
Description | FUNCTION: E3 Ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Able to specifically bind RNA. . |
Accessions | C9J9M8 Q86Y13 ENST00000463306.1 [Q86Y13-1] ENST00000479138.5 ENST00000361582.8 [Q86Y13-1] C9JRX4 ENST00000486815.5 ENST00000497905.5 C9J702 ENST00000495008.5 [Q86Y13-2] |