Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 17 studies | 47% ± 12% | |
peripheral blood | 16 studies | 36% ± 12% | |
intestine | 12 studies | 45% ± 20% | |
kidney | 8 studies | 46% ± 16% | |
bone marrow | 7 studies | 26% ± 10% | |
brain | 7 studies | 33% ± 11% | |
liver | 6 studies | 44% ± 20% | |
pancreas | 5 studies | 51% ± 21% | |
uterus | 5 studies | 52% ± 18% | |
eye | 5 studies | 27% ± 12% | |
lymph node | 4 studies | 35% ± 8% | |
placenta | 4 studies | 54% ± 24% | |
adipose | 4 studies | 25% ± 7% | |
prostate | 4 studies | 37% ± 8% | |
breast | 4 studies | 45% ± 5% | |
heart | 3 studies | 23% ± 5% | |
esophagus | 3 studies | 41% ± 23% | |
thymus | 3 studies | 51% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 2898.33 | 226 / 226 | 100% | 26.15 | 406 / 406 |
pancreas | 100% | 3711.15 | 328 / 328 | 100% | 27.83 | 178 / 178 |
prostate | 100% | 4378.28 | 245 / 245 | 100% | 30.09 | 502 / 502 |
kidney | 100% | 4441.13 | 89 / 89 | 100% | 31.30 | 900 / 901 |
uterus | 100% | 3358.44 | 170 / 170 | 100% | 19.99 | 458 / 459 |
thymus | 100% | 3414.94 | 652 / 653 | 100% | 40.19 | 604 / 605 |
stomach | 100% | 3545.43 | 359 / 359 | 100% | 23.74 | 285 / 286 |
breast | 100% | 3563.45 | 459 / 459 | 100% | 23.62 | 1114 / 1118 |
lung | 100% | 3281.59 | 577 / 578 | 100% | 17.23 | 1150 / 1155 |
intestine | 100% | 4231.27 | 966 / 966 | 99% | 24.75 | 523 / 527 |
skin | 99% | 4532.52 | 1799 / 1809 | 100% | 33.42 | 471 / 472 |
adrenal gland | 100% | 6182.18 | 258 / 258 | 99% | 25.65 | 228 / 230 |
bladder | 100% | 3905.81 | 21 / 21 | 99% | 19.21 | 497 / 504 |
ovary | 100% | 2849.14 | 180 / 180 | 98% | 12.16 | 421 / 430 |
brain | 98% | 1495.17 | 2584 / 2642 | 99% | 20.24 | 701 / 705 |
esophagus | 100% | 3309.74 | 1443 / 1445 | 97% | 12.75 | 178 / 183 |
adipose | 100% | 3631.36 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5507.90 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 29.49 | 29 / 29 |
spleen | 100% | 2859.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 14.32 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.66 | 1 / 1 |
muscle | 99% | 2932.45 | 795 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 28.34 | 79 / 80 |
heart | 99% | 2856.47 | 849 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 27% | 1335.89 | 253 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0006919 | Biological process | activation of cysteine-type endopeptidase activity involved in apoptotic process |
GO_0006978 | Biological process | DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator |
GO_0042771 | Biological process | intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator |
GO_0031571 | Biological process | mitotic G1 DNA damage checkpoint signaling |
GO_0000028 | Biological process | ribosomal small subunit assembly |
GO_0045727 | Biological process | positive regulation of translation |
GO_0022627 | Cellular component | cytosolic small ribosomal subunit |
GO_0005634 | Cellular component | nucleus |
GO_0008656 | Molecular function | cysteine-type endopeptidase activator activity involved in apoptotic process |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0008494 | Molecular function | translation activator activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | RPS27L |
Protein name | 40S ribosomal protein S27 Ribosomal protein eS27-like (40S ribosomal protein S27-like) (Small ribosomal subunit protein eS27-like) |
Synonyms | hCG_33491 |
Description | |
Accessions | Q71UM5 C9J1C5 ENST00000635699.1 ENST00000411926.1 C9JLI6 H0YMV8 ENST00000330964.10 ENST00000455271.5 ENST00000439025.1 ENST00000462430.5 |