Name | Number of supported studies | Average coverage | |
---|---|---|---|
non-classical monocyte | 8 studies | 21% ± 5% | |
endothelial cell | 6 studies | 17% ± 2% | |
plasmacytoid dendritic cell | 5 studies | 20% ± 5% | |
macrophage | 3 studies | 19% ± 1% |
Insufficient scRNA-seq data for expression of IFIT2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1173.87 | 2637 / 2642 | 100% | 43.66 | 702 / 705 |
kidney | 99% | 1103.20 | 88 / 89 | 96% | 27.72 | 864 / 901 |
breast | 97% | 830.88 | 447 / 459 | 96% | 40.03 | 1078 / 1118 |
lung | 99% | 1199.00 | 574 / 578 | 85% | 17.43 | 986 / 1155 |
thymus | 92% | 451.30 | 604 / 653 | 91% | 17.30 | 550 / 605 |
adrenal gland | 98% | 1065.91 | 254 / 258 | 84% | 13.45 | 194 / 230 |
ovary | 90% | 464.82 | 162 / 180 | 88% | 26.15 | 379 / 430 |
uterus | 94% | 462.58 | 160 / 170 | 83% | 20.68 | 380 / 459 |
liver | 85% | 703.54 | 193 / 226 | 80% | 17.26 | 324 / 406 |
skin | 77% | 473.69 | 1394 / 1809 | 84% | 22.76 | 396 / 472 |
bladder | 100% | 429.43 | 21 / 21 | 61% | 14.19 | 305 / 504 |
esophagus | 84% | 404.37 | 1208 / 1445 | 73% | 14.61 | 133 / 183 |
intestine | 91% | 481.02 | 883 / 966 | 54% | 7.89 | 286 / 527 |
prostate | 89% | 404.28 | 219 / 245 | 56% | 6.82 | 280 / 502 |
pancreas | 40% | 109.99 | 131 / 328 | 88% | 16.19 | 157 / 178 |
stomach | 62% | 243.57 | 223 / 359 | 65% | 8.97 | 187 / 286 |
spleen | 100% | 1452.69 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 96% | 796.04 | 1278 / 1335 | 0% | 0 | 0 / 0 |
adipose | 95% | 937.03 | 1139 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 2259.01 | 856 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 19.14 | 37 / 45 |
heart | 80% | 320.57 | 693 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 14.69 | 21 / 29 |
eye | 0% | 0 | 0 / 0 | 46% | 5.89 | 37 / 80 |
muscle | 22% | 63.30 | 178 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0009615 | Biological process | response to virus |
GO_0051607 | Biological process | defense response to virus |
GO_0008637 | Biological process | apoptotic mitochondrial changes |
GO_0032091 | Biological process | negative regulation of protein binding |
GO_0043065 | Biological process | positive regulation of apoptotic process |
GO_0140374 | Biological process | antiviral innate immune response |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | IFIT2 |
Protein name | Interferon induced protein with tetratricopeptide repeats 2 IFIT2 protein Interferon-induced protein with tetratricopeptide repeats 2 Interferon-induced protein with tetratricopeptide repeats 2 (IFIT-2) (ISG-54 K) (Interferon-induced 54 kDa protein) (IFI-54K) (P54) |
Synonyms | ISG54 CIG-42 G10P2 IFI54 |
Description | FUNCTION: IFN-induced antiviral protein which inhibits expression of viral messenger RNAs lacking 2'-O-methylation of the 5' cap. The ribose 2'-O-methylation would provide a molecular signature to distinguish between self and non-self mRNAs by the host during viral infection. Viruses evolved several ways to evade this restriction system such as encoding their own 2'-O-methylase for their mRNAs or by stealing host cap containing the 2'-O-methylation (cap snatching mechanism). Binds AU-rich viral RNAs, with or without 5' triphosphorylation, RNA-binding is required for antiviral activity. Can promote apoptosis. . |
Accessions | ENST00000680809.1 ENST00000679755.1 ENST00000681843.1 Q8IZ03 ENST00000611722.2 A0A7P0TAT2 ENST00000680381.1 A0A7P0T8B3 A0A087X279 ENST00000679734.1 P09913 ENST00000680954.1 A0A7P0T8R6 ENST00000679619.1 ENST00000371826.4 Q05DN2 ENST00000638108.1 |