Insufficient scRNA-seq data for expression of EXD1 at single-cell level.
Insufficient scRNA-seq data for expression of EXD1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 87% | 13.57 | 2300 / 2642 | 1% | 0.01 | 4 / 705 |
breast | 61% | 3.81 | 278 / 459 | 0% | 0.01 | 4 / 1118 |
adipose | 60% | 2.99 | 724 / 1204 | 0% | 0 | 0 / 0 |
lung | 58% | 3.09 | 338 / 578 | 1% | 0.01 | 7 / 1155 |
adrenal gland | 55% | 2.17 | 143 / 258 | 0% | 0.01 | 1 / 230 |
thymus | 52% | 2.35 | 339 / 653 | 2% | 0.04 | 15 / 605 |
liver | 52% | 2.28 | 118 / 226 | 0% | 0.01 | 1 / 406 |
skin | 51% | 2.51 | 929 / 1809 | 0% | 0 | 0 / 472 |
intestine | 50% | 1.91 | 486 / 966 | 0% | 0.00 | 2 / 527 |
spleen | 50% | 1.90 | 120 / 241 | 0% | 0 | 0 / 0 |
kidney | 48% | 1.99 | 43 / 89 | 0% | 0.01 | 2 / 901 |
prostate | 47% | 3.68 | 114 / 245 | 0% | 0.00 | 1 / 502 |
stomach | 43% | 1.33 | 154 / 359 | 2% | 0.03 | 5 / 286 |
peripheral blood | 42% | 1.50 | 387 / 929 | 0% | 0 | 0 / 0 |
esophagus | 40% | 1.66 | 574 / 1445 | 1% | 0.03 | 2 / 183 |
bladder | 38% | 1.05 | 8 / 21 | 0% | 0 | 0 / 504 |
uterus | 31% | 0.97 | 52 / 170 | 0% | 0 | 0 / 459 |
ovary | 25% | 0.80 | 45 / 180 | 1% | 0.02 | 6 / 430 |
pancreas | 25% | 0.69 | 82 / 328 | 0% | 0 | 0 / 178 |
blood vessel | 24% | 0.73 | 319 / 1335 | 0% | 0 | 0 / 0 |
heart | 22% | 0.65 | 189 / 861 | 0% | 0 | 0 / 0 |
muscle | 20% | 0.92 | 164 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0034587 | Biological process | piRNA processing |
GO_0051321 | Biological process | meiotic cell cycle |
GO_0031047 | Biological process | regulatory ncRNA-mediated gene silencing |
GO_1990923 | Cellular component | PET complex |
GO_0043186 | Cellular component | P granule |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0005515 | Molecular function | protein binding |
GO_0008408 | Molecular function | 3'-5' exonuclease activity |
GO_0003723 | Molecular function | RNA binding |
Gene name | EXD1 |
Protein name | Exonuclease 3'-5' domain containing 1 piRNA biogenesis protein EXD1 (Exonuclease 3'-5' domain-containing protein 1) (Exonuclease 3'-5' domain-like-containing protein 1) (Inactive exonuclease EXD1) |
Synonyms | EXDL1 |
Description | FUNCTION: RNA-binding component of the PET complex, a multiprotein complex required for the processing of piRNAs during spermatogenesis. The piRNA metabolic process mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposable elements, preventing their mobilization, which is essential for the germline integrity (By similarity). The PET complex is required during the secondary piRNAs metabolic process for the PIWIL2 slicing-triggered loading of PIWIL4 piRNAs. In the PET complex, EXD1 probably acts as an RNA adapter. EXD1 is an inactive exonuclease (By similarity). . |
Accessions | H0YK66 ENST00000458580.7 [Q8NHP7-3] ENST00000558396.1 Q8NHP7 ENST00000314992.9 [Q8NHP7-1] |