Insufficient scRNA-seq data for expression of CPSF4L at single-cell level.
Insufficient scRNA-seq data for expression of CPSF4L at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 94% | 11.79 | 432 / 459 | 15% | 0.31 | 163 / 1118 |
ovary | 91% | 8.64 | 163 / 180 | 18% | 0.27 | 76 / 430 |
pancreas | 96% | 9.38 | 314 / 328 | 3% | 0.06 | 6 / 178 |
uterus | 91% | 5.71 | 154 / 170 | 4% | 0.08 | 19 / 459 |
thymus | 89% | 6.79 | 583 / 653 | 1% | 0.01 | 6 / 605 |
prostate | 89% | 6.54 | 219 / 245 | 0% | 0.00 | 1 / 502 |
adipose | 89% | 9.45 | 1075 / 1204 | 0% | 0 | 0 / 0 |
bladder | 81% | 3.24 | 17 / 21 | 3% | 0.19 | 16 / 504 |
stomach | 77% | 4.58 | 278 / 359 | 7% | 0.11 | 19 / 286 |
intestine | 77% | 4.15 | 743 / 966 | 7% | 0.11 | 36 / 527 |
brain | 79% | 4.72 | 2084 / 2642 | 4% | 0.05 | 29 / 705 |
lung | 72% | 3.47 | 419 / 578 | 5% | 0.11 | 61 / 1155 |
skin | 75% | 4.47 | 1353 / 1809 | 2% | 0.04 | 9 / 472 |
liver | 68% | 3.23 | 154 / 226 | 6% | 0.13 | 23 / 406 |
adrenal gland | 71% | 2.89 | 182 / 258 | 1% | 0.01 | 2 / 230 |
kidney | 69% | 3.63 | 61 / 89 | 0% | 0.01 | 2 / 901 |
esophagus | 53% | 2.11 | 759 / 1445 | 10% | 0.20 | 19 / 183 |
spleen | 59% | 2.73 | 143 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 58% | 2.38 | 768 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 52% | 1.98 | 484 / 929 | 0% | 0 | 0 / 0 |
heart | 47% | 1.87 | 406 / 861 | 0% | 0 | 0 / 0 |
muscle | 34% | 1.12 | 272 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 9% | 0.11 | 7 / 80 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.05 | 2 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005847 | Cellular component | mRNA cleavage and polyadenylation specificity factor complex |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | CPSF4L |
Protein name | Cleavage and polyadenylation specificity factor subunit 4 (CPSF 30 kDa subunit) (Cleavage and polyadenylation specificity factor 30 kDa subunit) Putative cleavage and polyadenylation specificity factor subunit 4-like protein |
Synonyms | |
Description | FUNCTION: Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. CPSF4 binds RNA polymers with a preference for poly(U). . |
Accessions | A6NMK7 H9KVA5 ENST00000344935.8 ENST00000397671.1 |