Insufficient scRNA-seq data for expression of DDX28 at single-cell level.
Insufficient scRNA-seq data for expression of DDX28 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 829.30 | 1809 / 1809 | 100% | 26.38 | 470 / 472 |
breast | 100% | 542.06 | 459 / 459 | 99% | 20.68 | 1111 / 1118 |
kidney | 100% | 453.49 | 89 / 89 | 99% | 19.88 | 895 / 901 |
uterus | 99% | 468.46 | 169 / 170 | 100% | 25.70 | 458 / 459 |
liver | 100% | 430.74 | 225 / 226 | 100% | 16.25 | 404 / 406 |
bladder | 100% | 518.14 | 21 / 21 | 99% | 28.72 | 499 / 504 |
thymus | 99% | 405.09 | 648 / 653 | 100% | 20.48 | 603 / 605 |
esophagus | 99% | 534.59 | 1426 / 1445 | 100% | 19.51 | 183 / 183 |
adrenal gland | 100% | 906.84 | 258 / 258 | 98% | 21.29 | 226 / 230 |
intestine | 99% | 500.16 | 953 / 966 | 99% | 27.70 | 524 / 527 |
prostate | 98% | 344.30 | 241 / 245 | 99% | 16.26 | 498 / 502 |
stomach | 98% | 456.96 | 351 / 359 | 100% | 23.07 | 285 / 286 |
ovary | 96% | 437.57 | 173 / 180 | 100% | 20.59 | 430 / 430 |
brain | 96% | 372.24 | 2526 / 2642 | 100% | 23.67 | 705 / 705 |
pancreas | 95% | 288.69 | 313 / 328 | 100% | 17.55 | 178 / 178 |
lung | 90% | 412.78 | 519 / 578 | 100% | 21.35 | 1151 / 1155 |
eye | 0% | 0 | 0 / 0 | 100% | 36.52 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 40.65 | 29 / 29 |
spleen | 100% | 825.09 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 25.18 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.54 | 1 / 1 |
muscle | 100% | 811.25 | 802 / 803 | 0% | 0 | 0 / 0 |
adipose | 100% | 502.13 | 1202 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 600.49 | 874 / 929 | 0% | 0 | 0 / 0 |
heart | 90% | 388.93 | 779 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 90% | 282.79 | 1196 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1902775 | Biological process | mitochondrial large ribosomal subunit assembly |
GO_0005730 | Cellular component | nucleolus |
GO_0035770 | Cellular component | ribonucleoprotein granule |
GO_0005739 | Cellular component | mitochondrion |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0042645 | Cellular component | mitochondrial nucleoid |
GO_0019843 | Molecular function | rRNA binding |
GO_0003724 | Molecular function | RNA helicase activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0005524 | Molecular function | ATP binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | DDX28 |
Protein name | Probable ATP-dependent RNA helicase DDX28 (EC 3.6.4.13) (Mitochondrial DEAD box protein 28) |
Synonyms | MDDX28 |
Description | FUNCTION: Plays an essential role in facilitating the proper assembly of the mitochondrial large ribosomal subunit and its helicase activity is essential for this function . May be involved in RNA processing or transport. Has RNA and Mg(2+)-dependent ATPase activity . . |
Accessions | ENST00000332395.7 Q9NUL7 |