Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 10 studies | 44% ± 24% | |
endothelial cell | 9 studies | 30% ± 17% | |
GABAergic neuron | 7 studies | 43% ± 21% | |
microglial cell | 6 studies | 21% ± 4% | |
retinal cone cell | 6 studies | 23% ± 7% | |
oligodendrocyte | 6 studies | 25% ± 8% | |
interneuron | 5 studies | 44% ± 25% | |
macrophage | 5 studies | 33% ± 5% | |
neuron | 4 studies | 30% ± 5% | |
granule cell | 4 studies | 21% ± 4% | |
astrocyte | 4 studies | 26% ± 10% | |
oligodendrocyte precursor cell | 4 studies | 29% ± 8% | |
endothelial cell of lymphatic vessel | 4 studies | 19% ± 1% | |
GABAergic interneuron | 3 studies | 25% ± 2% | |
retinal rod cell | 3 studies | 23% ± 3% | |
monocyte | 3 studies | 22% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1167.80 | 1441 / 1445 | 100% | 8.10 | 183 / 183 |
brain | 100% | 4661.72 | 2636 / 2642 | 100% | 24.60 | 703 / 705 |
thymus | 100% | 1798.00 | 653 / 653 | 97% | 8.31 | 588 / 605 |
lung | 100% | 1870.40 | 578 / 578 | 97% | 6.41 | 1120 / 1155 |
breast | 100% | 1538.56 | 459 / 459 | 97% | 8.11 | 1080 / 1118 |
skin | 100% | 1098.40 | 1801 / 1809 | 97% | 9.36 | 458 / 472 |
kidney | 100% | 1114.11 | 89 / 89 | 94% | 8.18 | 849 / 901 |
adrenal gland | 99% | 1142.54 | 256 / 258 | 93% | 15.84 | 214 / 230 |
stomach | 99% | 911.26 | 354 / 359 | 93% | 5.66 | 265 / 286 |
uterus | 99% | 1399.51 | 168 / 170 | 92% | 5.64 | 422 / 459 |
bladder | 100% | 1274.62 | 21 / 21 | 88% | 4.65 | 444 / 504 |
intestine | 100% | 1327.40 | 966 / 966 | 88% | 4.09 | 463 / 527 |
prostate | 99% | 1045.78 | 243 / 245 | 88% | 4.30 | 444 / 502 |
pancreas | 88% | 573.67 | 290 / 328 | 94% | 5.57 | 167 / 178 |
ovary | 100% | 1052.52 | 180 / 180 | 69% | 2.66 | 297 / 430 |
liver | 94% | 585.16 | 212 / 226 | 62% | 2.46 | 252 / 406 |
adipose | 100% | 1626.63 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1726.86 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1648.52 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 98% | 1118.44 | 785 / 803 | 0% | 0 | 0 / 0 |
heart | 93% | 897.24 | 802 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 91% | 1071.56 | 847 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 7.11 | 41 / 45 |
eye | 0% | 0 | 0 / 0 | 83% | 4.69 | 66 / 80 |
lymph node | 0% | 0 | 0 / 0 | 66% | 4.12 | 19 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0046488 | Biological process | phosphatidylinositol metabolic process |
GO_0016191 | Biological process | synaptic vesicle uncoating |
GO_0007612 | Biological process | learning |
GO_0048488 | Biological process | synaptic vesicle endocytosis |
GO_0061024 | Biological process | membrane organization |
GO_0046856 | Biological process | phosphatidylinositol dephosphorylation |
GO_1904980 | Biological process | positive regulation of endosome organization |
GO_0043647 | Biological process | inositol phosphate metabolic process |
GO_0036092 | Biological process | phosphatidylinositol-3-phosphate biosynthetic process |
GO_0016082 | Biological process | synaptic vesicle priming |
GO_0006836 | Biological process | neurotransmitter transport |
GO_0006661 | Biological process | phosphatidylinositol biosynthetic process |
GO_0048489 | Biological process | synaptic vesicle transport |
GO_0098793 | Cellular component | presynapse |
GO_0030117 | Cellular component | membrane coat |
GO_0005874 | Cellular component | microtubule |
GO_0012506 | Cellular component | vesicle membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0097060 | Cellular component | synaptic membrane |
GO_0043195 | Cellular component | terminal bouton |
GO_0005829 | Cellular component | cytosol |
GO_0030132 | Cellular component | clathrin coat of coated pit |
GO_0004438 | Molecular function | phosphatidylinositol-3-phosphate phosphatase activity |
GO_0052658 | Molecular function | inositol-1,4,5-trisphosphate 5-phosphatase activity |
GO_0004439 | Molecular function | phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity |
GO_0034595 | Molecular function | phosphatidylinositol phosphate 5-phosphatase activity |
GO_0034596 | Molecular function | phosphatidylinositol phosphate 4-phosphatase activity |
GO_0052629 | Molecular function | phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity |
GO_0003723 | Molecular function | RNA binding |
GO_0043812 | Molecular function | phosphatidylinositol-4-phosphate phosphatase activity |
GO_0017124 | Molecular function | SH3 domain binding |
GO_0043813 | Molecular function | phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SYNJ1 |
Protein name | phosphoinositide 5-phosphatase (EC 3.1.3.36) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1) Synaptojanin 1 |
Synonyms | KIAA0910 |
Description | FUNCTION: Phosphatase that acts on various phosphoinositides, including phosphatidylinositol 4-phosphate, phosphatidylinositol (4,5)-bisphosphate and phosphatidylinositol (3,4,5)-trisphosphate . Has a role in clathrin-mediated endocytosis (By similarity). Hydrolyzes PIP2 bound to actin regulatory proteins resulting in the rearrangement of actin filaments downstream of tyrosine kinase and ASH/GRB2 (By similarity). . |
Accessions | ENST00000382499.7 ENST00000456084.1 H7BZ56 ENST00000674308.1 [O43426-1] B9EGN3 ENST00000382491.7 ENST00000418301.3 H7BZC2 O43426 Q05CZ1 ENST00000438952.5 ENST00000357345.7 [O43426-4] ENST00000674204.1 [O43426-2] ENST00000630077.3 J3KPK1 J3KQV8 C9J1Z6 ENST00000674351.1 [O43426-2] ENST00000433931.7 C9JW66 Q1ZYQ4 C9JFZ1 ENST00000429236.5 A0A0D9SGJ6 |