Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 24 studies | 30% ± 9% | |
classical monocyte | 21 studies | 33% ± 12% | |
macrophage | 16 studies | 23% ± 5% | |
non-classical monocyte | 15 studies | 27% ± 11% | |
endothelial cell of lymphatic vessel | 14 studies | 26% ± 5% | |
fibroblast | 12 studies | 21% ± 3% | |
ciliated cell | 12 studies | 31% ± 8% | |
astrocyte | 11 studies | 27% ± 9% | |
basal cell | 10 studies | 31% ± 11% | |
epithelial cell | 10 studies | 30% ± 10% | |
capillary endothelial cell | 10 studies | 22% ± 4% | |
pericyte | 10 studies | 19% ± 3% | |
monocyte | 9 studies | 25% ± 8% | |
endothelial cell of artery | 9 studies | 25% ± 6% | |
vein endothelial cell | 9 studies | 26% ± 11% | |
smooth muscle cell | 8 studies | 19% ± 2% | |
secretory cell | 7 studies | 28% ± 9% | |
respiratory goblet cell | 6 studies | 27% ± 6% | |
conventional dendritic cell | 6 studies | 26% ± 12% | |
endothelial cell of vascular tree | 6 studies | 22% ± 8% | |
goblet cell | 6 studies | 22% ± 4% | |
type I pneumocyte | 5 studies | 21% ± 3% | |
dendritic cell | 5 studies | 32% ± 14% | |
regulatory T cell | 5 studies | 17% ± 1% | |
abnormal cell | 5 studies | 23% ± 6% | |
alveolar macrophage | 5 studies | 27% ± 7% | |
squamous epithelial cell | 4 studies | 34% ± 24% | |
glutamatergic neuron | 4 studies | 35% ± 22% | |
myofibroblast cell | 4 studies | 20% ± 3% | |
myeloid cell | 4 studies | 37% ± 7% | |
lymphocyte | 4 studies | 18% ± 2% | |
enterocyte | 4 studies | 19% ± 2% | |
connective tissue cell | 4 studies | 19% ± 3% | |
CD4-positive, alpha-beta memory T cell | 3 studies | 17% ± 1% | |
club cell | 3 studies | 23% ± 1% | |
ionocyte | 3 studies | 25% ± 6% | |
plasmablast | 3 studies | 20% ± 1% | |
retinal ganglion cell | 3 studies | 37% ± 14% | |
intermediate monocyte | 3 studies | 39% ± 19% | |
luminal cell of prostate epithelium | 3 studies | 21% ± 5% | |
muscle cell | 3 studies | 23% ± 2% | |
effector memory CD4-positive, alpha-beta T cell | 3 studies | 19% ± 2% | |
brush cell | 3 studies | 24% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 40751.92 | 1445 / 1445 | 100% | 420.97 | 183 / 183 |
uterus | 100% | 42293.07 | 170 / 170 | 99% | 102.33 | 456 / 459 |
intestine | 100% | 38875.27 | 966 / 966 | 99% | 141.55 | 522 / 527 |
prostate | 100% | 37283.36 | 245 / 245 | 99% | 82.14 | 496 / 502 |
skin | 100% | 62018.32 | 1809 / 1809 | 98% | 127.27 | 464 / 472 |
ovary | 100% | 30131.62 | 180 / 180 | 98% | 147.77 | 422 / 430 |
breast | 100% | 28343.66 | 458 / 459 | 98% | 94.43 | 1098 / 1118 |
stomach | 100% | 26952.49 | 359 / 359 | 98% | 169.70 | 280 / 286 |
bladder | 100% | 39666.95 | 21 / 21 | 97% | 115.32 | 490 / 504 |
thymus | 99% | 19338.46 | 648 / 653 | 97% | 60.71 | 586 / 605 |
lung | 100% | 35417.71 | 576 / 578 | 95% | 132.87 | 1101 / 1155 |
adrenal gland | 100% | 20975.31 | 257 / 258 | 90% | 46.45 | 207 / 230 |
brain | 92% | 18506.58 | 2440 / 2642 | 97% | 101.84 | 683 / 705 |
kidney | 96% | 18686.45 | 85 / 89 | 93% | 65.05 | 839 / 901 |
pancreas | 80% | 9647.17 | 262 / 328 | 98% | 186.27 | 174 / 178 |
liver | 88% | 11135.18 | 199 / 226 | 81% | 46.32 | 330 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 105.34 | 80 / 80 |
muscle | 100% | 84885.59 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 32325.21 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 235.76 | 1 / 1 |
blood vessel | 100% | 49993.33 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 28460.84 | 1201 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 26705.52 | 842 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 126.68 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 86% | 43.82 | 25 / 29 |
peripheral blood | 84% | 16806.57 | 783 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0002522 | Biological process | leukocyte migration involved in immune response |
GO_0034332 | Biological process | adherens junction organization |
GO_2000689 | Biological process | actomyosin contractile ring assembly actin filament organization |
GO_0071260 | Biological process | cellular response to mechanical stimulus |
GO_0071498 | Biological process | cellular response to fluid shear stress |
GO_0061436 | Biological process | establishment of skin barrier |
GO_0055013 | Biological process | cardiac muscle cell development |
GO_0043114 | Biological process | regulation of vascular permeability |
GO_0010761 | Biological process | fibroblast migration |
GO_0048741 | Biological process | skeletal muscle fiber development |
GO_0035264 | Biological process | multicellular organism growth |
GO_0042060 | Biological process | wound healing |
GO_0006997 | Biological process | nucleus organization |
GO_0045109 | Biological process | intermediate filament organization |
GO_0014866 | Biological process | skeletal myofibril assembly |
GO_0007005 | Biological process | mitochondrion organization |
GO_0032287 | Biological process | peripheral nervous system myelin maintenance |
GO_0120193 | Biological process | tight junction organization |
GO_0045104 | Biological process | intermediate filament cytoskeleton organization |
GO_0022904 | Biological process | respiratory electron transport chain |
GO_0071464 | Biological process | cellular response to hydrostatic pressure |
GO_0045445 | Biological process | myoblast differentiation |
GO_0003334 | Biological process | keratinocyte development |
GO_0045214 | Biological process | sarcomere organization |
GO_0031581 | Biological process | hemidesmosome assembly |
GO_0010467 | Biological process | gene expression |
GO_0000902 | Biological process | cell morphogenesis |
GO_0008104 | Biological process | protein localization |
GO_0019226 | Biological process | transmission of nerve impulse |
GO_0010818 | Biological process | T cell chemotaxis |
GO_0032094 | Biological process | response to food |
GO_0043933 | Biological process | protein-containing complex organization |
GO_0005903 | Cellular component | brush border |
GO_0016528 | Cellular component | sarcoplasm |
GO_0043209 | Cellular component | myelin sheath |
GO_0005886 | Cellular component | plasma membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0043034 | Cellular component | costamere |
GO_0030018 | Cellular component | Z disc |
GO_0042383 | Cellular component | sarcolemma |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005882 | Cellular component | intermediate filament |
GO_0005925 | Cellular component | focal adhesion |
GO_0030056 | Cellular component | hemidesmosome |
GO_0030425 | Cellular component | dendrite |
GO_0045111 | Cellular component | intermediate filament cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005741 | Cellular component | mitochondrial outer membrane |
GO_0030424 | Cellular component | axon |
GO_0008307 | Molecular function | structural constituent of muscle |
GO_0045296 | Molecular function | cadherin binding |
GO_0005200 | Molecular function | structural constituent of cytoskeleton |
GO_0051015 | Molecular function | actin filament binding |
GO_0002162 | Molecular function | dystroglycan binding |
GO_0003723 | Molecular function | RNA binding |
GO_0030506 | Molecular function | ankyrin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PLEC |
Protein name | Plectin Plectin (PCN) (PLTN) (Hemidesmosomal protein 1) (HD1) (Plectin-1) |
Synonyms | PLEC1 |
Description | FUNCTION: Interlinks intermediate filaments with microtubules and microfilaments and anchors intermediate filaments to desmosomes or hemidesmosomes. Could also bind muscle proteins such as actin to membrane complexes in muscle. May be involved not only in the filaments network, but also in the regulation of their dynamics. Structural component of muscle. Isoform 9 plays a major role in the maintenance of myofiber integrity. . |
Accessions | Q15149 ENST00000528025.6 ENST00000356346.7 [Q15149-9] ENST00000322810.8 [Q15149-1] H0YDN1 E9PMV1 ENST00000398774.6 [Q15149-7] ENST00000354589.7 [Q15149-5] ENST00000687971.1 A0A8I5KUE3 ENST00000693060.1 ENST00000354958.6 [Q15149-8] ENST00000357649.6 [Q15149-6] ENST00000345136.8 [Q15149-4] A0A8I5KSD5 ENST00000527303.2 ENST00000527096.5 [Q15149-3] A0A8I5KYZ1 ENST00000436759.6 [Q15149-2] ENST00000685198.1 |