I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 3 studies | 31% ± 8% | |
| GABAergic neuron | 3 studies | 21% ± 5% | |
| glutamatergic neuron | 3 studies | 31% ± 8% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 3 studies | 31% ± 8% | |
| GABAergic neuron | 3 studies | 21% ± 5% | |
| glutamatergic neuron | 3 studies | 31% ± 8% |
Insufficient scRNA-seq data for expression of UBFD1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2857.98 | 1445 / 1445 | 100% | 26.40 | 183 / 183 |
| ovary | 100% | 3514.13 | 180 / 180 | 100% | 30.60 | 430 / 430 |
| breast | 100% | 2901.66 | 459 / 459 | 100% | 46.46 | 1117 / 1118 |
| prostate | 100% | 3543.58 | 245 / 245 | 100% | 34.39 | 501 / 502 |
| skin | 100% | 3806.71 | 1808 / 1809 | 100% | 43.36 | 471 / 472 |
| brain | 99% | 3669.00 | 2621 / 2642 | 100% | 35.67 | 705 / 705 |
| thymus | 100% | 3588.25 | 653 / 653 | 99% | 38.72 | 600 / 605 |
| intestine | 100% | 2763.66 | 965 / 966 | 99% | 26.99 | 523 / 527 |
| lung | 99% | 2391.74 | 574 / 578 | 100% | 28.93 | 1152 / 1155 |
| stomach | 100% | 2046.05 | 358 / 359 | 99% | 25.82 | 284 / 286 |
| bladder | 100% | 3162.38 | 21 / 21 | 99% | 25.53 | 497 / 504 |
| uterus | 100% | 3517.30 | 170 / 170 | 98% | 29.86 | 452 / 459 |
| kidney | 100% | 2927.67 | 89 / 89 | 98% | 26.82 | 887 / 901 |
| pancreas | 99% | 1690.05 | 325 / 328 | 99% | 24.09 | 176 / 178 |
| adrenal gland | 100% | 4697.91 | 258 / 258 | 98% | 29.49 | 225 / 230 |
| liver | 100% | 2127.04 | 226 / 226 | 94% | 16.34 | 383 / 406 |
| adipose | 100% | 2918.38 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 23.15 | 29 / 29 |
| muscle | 100% | 11151.58 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2618.47 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 25.64 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 16.10 | 1 / 1 |
| blood vessel | 100% | 2905.61 | 1333 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 23.06 | 79 / 80 |
| heart | 97% | 3091.40 | 839 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 36% | 1073.91 | 335 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0045296 | Molecular function | cadherin binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | UBFD1 |
| Protein name | Ubiquitin family domain containing 1 Ubiquitin domain-containing protein UBFD1 (Ubiquitin-binding protein homolog) |
| Synonyms | UBPH |
| Description | FUNCTION: May play a role as NF-kappa-B regulator. . |
| Accessions | H3BUM8 O14562 ENST00000395878.8 ENST00000567264.1 ENST00000567212.5 H3BRL3 |
