Name | Number of supported studies | Average coverage | |
---|---|---|---|
natural killer cell | 7 studies | 20% ± 5% | |
endothelial cell | 6 studies | 24% ± 6% | |
epithelial cell | 6 studies | 27% ± 11% | |
B cell | 4 studies | 16% ± 1% | |
CD16-negative, CD56-bright natural killer cell, human | 4 studies | 21% ± 4% | |
CD16-positive, CD56-dim natural killer cell, human | 4 studies | 21% ± 4% | |
CD8-positive, alpha-beta memory T cell | 4 studies | 18% ± 3% | |
gamma-delta T cell | 4 studies | 25% ± 9% | |
macrophage | 4 studies | 21% ± 4% | |
CD8-positive, alpha-beta T cell | 3 studies | 20% ± 4% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 24% ± 2% | |
microglial cell | 3 studies | 18% ± 2% | |
lymphocyte | 3 studies | 20% ± 3% | |
glutamatergic neuron | 3 studies | 31% ± 11% | |
dendritic cell | 3 studies | 26% ± 10% | |
transit amplifying cell | 3 studies | 25% ± 9% | |
astrocyte | 3 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2923.85 | 1445 / 1445 | 100% | 22.06 | 183 / 183 |
stomach | 100% | 2288.38 | 359 / 359 | 100% | 23.09 | 286 / 286 |
skin | 100% | 3163.92 | 1809 / 1809 | 100% | 25.85 | 471 / 472 |
uterus | 100% | 3426.74 | 170 / 170 | 100% | 24.12 | 458 / 459 |
thymus | 100% | 3138.83 | 653 / 653 | 100% | 20.69 | 603 / 605 |
intestine | 100% | 3165.56 | 966 / 966 | 100% | 23.82 | 525 / 527 |
lung | 100% | 2927.58 | 578 / 578 | 100% | 20.69 | 1150 / 1155 |
ovary | 100% | 2895.41 | 180 / 180 | 100% | 16.62 | 428 / 430 |
brain | 100% | 2509.53 | 2635 / 2642 | 100% | 23.42 | 703 / 705 |
bladder | 100% | 3102.00 | 21 / 21 | 99% | 22.67 | 501 / 504 |
pancreas | 100% | 1389.86 | 327 / 328 | 99% | 18.62 | 177 / 178 |
breast | 100% | 2921.86 | 459 / 459 | 99% | 17.64 | 1108 / 1118 |
prostate | 100% | 2795.62 | 245 / 245 | 99% | 15.96 | 497 / 502 |
kidney | 100% | 1937.49 | 89 / 89 | 99% | 15.76 | 890 / 901 |
adrenal gland | 100% | 2218.53 | 258 / 258 | 98% | 16.46 | 226 / 230 |
liver | 100% | 1474.47 | 226 / 226 | 94% | 10.32 | 380 / 406 |
adipose | 100% | 2877.22 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2665.80 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 21.37 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 28.18 | 29 / 29 |
muscle | 100% | 2396.80 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3902.04 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.17 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.96 | 1 / 1 |
heart | 99% | 1618.44 | 853 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 2944.54 | 916 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0050779 | Biological process | RNA destabilization |
GO_0016607 | Cellular component | nuclear speck |
GO_0032991 | Cellular component | protein-containing complex |
GO_1990904 | Cellular component | ribonucleoprotein complex |
GO_0140262 | Molecular function | mRNA cap binding complex binding |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | ZC3H18 |
Protein name | Zinc finger CCCH domain-containing protein 18 (Nuclear protein NHN1) Zinc finger CCCH-type containing 18 |
Synonyms | NHN1 |
Description | |
Accessions | ENST00000569435.5 ENST00000452588.6 ENST00000565583.1 ENST00000567085.1 E7ERS3 H3BP01 H3BRN6 H3BPD0 ENST00000564341.1 Q86VM9 H3BRH3 ENST00000301011.10 |