Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 12 studies | 25% ± 10% | |
| GABAergic neuron | 7 studies | 34% ± 20% | |
| oligodendrocyte | 7 studies | 25% ± 8% | |
| astrocyte | 6 studies | 30% ± 11% | |
| interneuron | 5 studies | 35% ± 22% | |
| oligodendrocyte precursor cell | 5 studies | 28% ± 10% | |
| glutamatergic neuron | 5 studies | 45% ± 23% | |
| microglial cell | 4 studies | 25% ± 6% | |
| epithelial cell | 4 studies | 38% ± 8% | |
| adipocyte | 4 studies | 20% ± 4% | |
| hepatocyte | 4 studies | 37% ± 16% | |
| fibroblast | 4 studies | 20% ± 6% | |
| macrophage | 4 studies | 24% ± 4% | |
| goblet cell | 4 studies | 27% ± 15% | |
| ciliated cell | 3 studies | 23% ± 2% | |
| Mueller cell | 3 studies | 17% ± 1% | |
| abnormal cell | 3 studies | 28% ± 12% | |
| endothelial cell of lymphatic vessel | 3 studies | 19% ± 3% | |
| smooth muscle cell | 3 studies | 16% ± 0% | |
| basal cell | 3 studies | 30% ± 11% | |
| transit amplifying cell | 3 studies | 28% ± 16% | |
| neuron | 3 studies | 31% ± 10% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 7 studies | 37% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 3715.67 | 1445 / 1445 | 100% | 39.05 | 183 / 183 |
| intestine | 100% | 3711.98 | 966 / 966 | 100% | 31.51 | 527 / 527 |
| stomach | 100% | 2840.06 | 359 / 359 | 100% | 31.29 | 286 / 286 |
| brain | 100% | 2839.28 | 2641 / 2642 | 100% | 54.75 | 705 / 705 |
| lung | 100% | 3003.83 | 578 / 578 | 100% | 31.81 | 1154 / 1155 |
| ovary | 100% | 3693.25 | 180 / 180 | 100% | 22.82 | 429 / 430 |
| thymus | 100% | 5382.81 | 653 / 653 | 100% | 43.76 | 602 / 605 |
| breast | 100% | 3668.43 | 459 / 459 | 99% | 35.17 | 1112 / 1118 |
| pancreas | 100% | 2089.49 | 327 / 328 | 99% | 26.37 | 177 / 178 |
| prostate | 100% | 3400.17 | 245 / 245 | 99% | 35.26 | 497 / 502 |
| bladder | 100% | 3733.71 | 21 / 21 | 99% | 25.68 | 498 / 504 |
| uterus | 100% | 4724.32 | 170 / 170 | 98% | 29.93 | 450 / 459 |
| kidney | 100% | 2447.65 | 89 / 89 | 98% | 25.41 | 883 / 901 |
| skin | 100% | 3956.84 | 1809 / 1809 | 97% | 29.09 | 459 / 472 |
| adrenal gland | 100% | 3491.09 | 258 / 258 | 97% | 24.55 | 222 / 230 |
| liver | 100% | 2879.38 | 226 / 226 | 96% | 20.00 | 388 / 406 |
| adipose | 100% | 3540.51 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 4130.42 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2754.90 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 30.56 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 11.24 | 1 / 1 |
| muscle | 99% | 1547.87 | 797 / 803 | 0% | 0 | 0 / 0 |
| heart | 99% | 2058.67 | 851 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 91% | 18.88 | 73 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 86% | 18.61 | 25 / 29 |
| peripheral blood | 42% | 944.47 | 389 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0008298 | Biological process | intracellular mRNA localization |
| GO_0010628 | Biological process | positive regulation of gene expression |
| GO_0006351 | Biological process | DNA-templated transcription |
| GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
| GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0043198 | Cellular component | dendritic shaft |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0043025 | Cellular component | neuronal cell body |
| GO_0016020 | Cellular component | membrane |
| GO_0005840 | Cellular component | ribosome |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0003723 | Molecular function | RNA binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003697 | Molecular function | single-stranded DNA binding |
| GO_0003729 | Molecular function | mRNA binding |
| Gene name | FUBP3 |
| Protein name | Far upstream element-binding protein 3 (FUSE-binding protein 3) Far upstream element binding protein 3 |
| Synonyms | FBP3 |
| Description | FUNCTION: May interact with single-stranded DNA from the far-upstream element (FUSE). May activate gene expression. |
| Accessions | A0A494C1K6 Q96I24 ENST00000650723.1 ENST00000319725.10 [Q96I24-1] ENST00000699747.1 A0A8V8TNQ2 |