Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 7 studies | 45% ± 16% | |
progenitor cell | 6 studies | 34% ± 17% | |
transit amplifying cell | 6 studies | 36% ± 19% | |
ciliated cell | 6 studies | 36% ± 8% | |
plasmablast | 5 studies | 37% ± 6% | |
epithelial cell of proximal tubule | 5 studies | 22% ± 3% | |
macrophage | 5 studies | 23% ± 8% | |
endothelial cell | 5 studies | 28% ± 11% | |
goblet cell | 5 studies | 29% ± 9% | |
intestinal crypt stem cell | 5 studies | 31% ± 12% | |
basal cell | 5 studies | 35% ± 18% | |
conventional dendritic cell | 4 studies | 29% ± 14% | |
enterocyte | 4 studies | 22% ± 2% | |
erythroblast | 4 studies | 38% ± 12% | |
abnormal cell | 4 studies | 22% ± 6% | |
natural killer cell | 4 studies | 17% ± 1% | |
hematopoietic precursor cell | 3 studies | 36% ± 14% | |
kidney loop of Henle epithelial cell | 3 studies | 22% ± 4% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 24% ± 1% | |
enteroendocrine cell | 3 studies | 30% ± 6% | |
pericyte | 3 studies | 23% ± 6% | |
common myeloid progenitor | 3 studies | 21% ± 4% | |
fibroblast | 3 studies | 27% ± 11% | |
dendritic cell | 3 studies | 31% ± 9% | |
granulocyte monocyte progenitor cell | 3 studies | 34% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2458.55 | 1445 / 1445 | 100% | 27.25 | 183 / 183 |
liver | 100% | 4119.04 | 226 / 226 | 100% | 34.85 | 405 / 406 |
uterus | 100% | 1479.30 | 170 / 170 | 100% | 34.22 | 457 / 459 |
ovary | 99% | 1104.66 | 179 / 180 | 100% | 31.93 | 430 / 430 |
adrenal gland | 100% | 2958.10 | 258 / 258 | 99% | 20.21 | 228 / 230 |
prostate | 100% | 2032.10 | 245 / 245 | 98% | 31.31 | 493 / 502 |
bladder | 100% | 1983.10 | 21 / 21 | 98% | 45.33 | 494 / 504 |
intestine | 100% | 2685.92 | 966 / 966 | 97% | 54.16 | 509 / 527 |
skin | 100% | 2500.34 | 1806 / 1809 | 96% | 28.28 | 454 / 472 |
stomach | 100% | 1915.10 | 359 / 359 | 95% | 42.48 | 273 / 286 |
lung | 98% | 1598.79 | 567 / 578 | 94% | 21.41 | 1090 / 1155 |
brain | 99% | 1847.45 | 2627 / 2642 | 90% | 17.06 | 635 / 705 |
pancreas | 100% | 1435.81 | 328 / 328 | 89% | 17.71 | 158 / 178 |
kidney | 100% | 3283.57 | 89 / 89 | 85% | 19.09 | 762 / 901 |
thymus | 100% | 1591.69 | 650 / 653 | 80% | 13.43 | 486 / 605 |
breast | 100% | 1929.79 | 458 / 459 | 77% | 15.42 | 862 / 1118 |
eye | 0% | 0 | 0 / 0 | 100% | 37.79 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 52.66 | 29 / 29 |
muscle | 100% | 4100.90 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2292.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 26.08 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 59.05 | 1 / 1 |
adipose | 100% | 1992.85 | 1202 / 1204 | 0% | 0 | 0 / 0 |
heart | 99% | 4747.46 | 854 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 97% | 1157.17 | 1296 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 78% | 1796.47 | 724 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006412 | Biological process | translation |
GO_0032543 | Biological process | mitochondrial translation |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0006390 | Biological process | mitochondrial transcription |
GO_0005762 | Cellular component | mitochondrial large ribosomal subunit |
GO_0005739 | Cellular component | mitochondrion |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0003735 | Molecular function | structural constituent of ribosome |
GO_0005515 | Molecular function | protein binding |
GO_0003729 | Molecular function | mRNA binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | MRPL12 |
Protein name | Large ribosomal subunit protein bL12m (39S ribosomal protein L12, mitochondrial) (L12mt) (MRP-L12) (5c5-2) |
Synonyms | MRPL7 RPML12 |
Description | FUNCTION: As a component of the mitochondrial large ribosomal subunit, it plays a role in mitochondrial translation . Associates with mitochondrial RNA polymerase to activate transcription. . |
Accessions | ENST00000333676.8 P52815 |