I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 5 studies | 31% ± 8% | |
| endothelial cell | 3 studies | 22% ± 3% | |
| dendritic cell | 3 studies | 20% ± 2% | |
| intestinal crypt stem cell | 3 studies | 19% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 5 studies | 31% ± 8% | |
| endothelial cell | 3 studies | 22% ± 3% | |
| dendritic cell | 3 studies | 20% ± 2% | |
| intestinal crypt stem cell | 3 studies | 19% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| liver | 3 studies | 22% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2581.88 | 1445 / 1445 | 100% | 28.85 | 183 / 183 |
| liver | 100% | 1555.16 | 226 / 226 | 100% | 21.50 | 406 / 406 |
| prostate | 100% | 2945.10 | 245 / 245 | 100% | 41.77 | 502 / 502 |
| stomach | 100% | 1902.87 | 359 / 359 | 100% | 40.03 | 286 / 286 |
| thymus | 100% | 2790.99 | 653 / 653 | 100% | 40.00 | 605 / 605 |
| uterus | 100% | 2991.25 | 170 / 170 | 100% | 41.15 | 459 / 459 |
| brain | 100% | 2530.20 | 2641 / 2642 | 100% | 47.00 | 705 / 705 |
| intestine | 100% | 3037.59 | 966 / 966 | 100% | 49.01 | 526 / 527 |
| bladder | 100% | 2982.76 | 21 / 21 | 100% | 36.75 | 503 / 504 |
| skin | 100% | 3027.59 | 1809 / 1809 | 100% | 34.43 | 471 / 472 |
| pancreas | 100% | 1506.69 | 327 / 328 | 100% | 32.91 | 178 / 178 |
| kidney | 100% | 2161.00 | 89 / 89 | 100% | 24.30 | 897 / 901 |
| breast | 100% | 2590.88 | 459 / 459 | 99% | 34.10 | 1112 / 1118 |
| lung | 100% | 2173.56 | 578 / 578 | 99% | 30.79 | 1147 / 1155 |
| adrenal gland | 100% | 2678.08 | 258 / 258 | 99% | 33.23 | 228 / 230 |
| ovary | 100% | 2964.28 | 180 / 180 | 99% | 21.37 | 425 / 430 |
| adipose | 100% | 2474.36 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 43.28 | 29 / 29 |
| muscle | 100% | 2411.26 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2756.89 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 39.56 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 27.95 | 1 / 1 |
| blood vessel | 100% | 2555.71 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 31.41 | 79 / 80 |
| heart | 99% | 1477.54 | 849 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 88% | 1413.47 | 820 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0042273 | Biological process | ribosomal large subunit biogenesis |
| GO_0042274 | Biological process | ribosomal small subunit biogenesis |
| GO_0005730 | Cellular component | nucleolus |
| GO_0001652 | Cellular component | granular component |
| GO_0005694 | Cellular component | chromosome |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0003677 | Molecular function | DNA binding |
| GO_0140693 | Molecular function | molecular condensate scaffold activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0003723 | Molecular function | RNA binding |
| Gene name | SURF6 |
| Protein name | Surfeit locus protein 6 |
| Synonyms | SURF-6 |
| Description | FUNCTION: Binds to both DNA and RNA in vitro, with a stronger binding capacity for RNA. May represent a nucleolar constitutive protein involved in ribosomal biosynthesis or assembly (By similarity). . |
| Accessions | ENST00000629980.2 ENST00000372022.6 O75683 |
