GO_0003677 | OmnibusX

I. Literature review

Name	DNA binding
ID	GO_0003677
collection_id	Molecular function
Alternative ID	GO:0043566
Description	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Related synonym	microtubule/chromatin interaction, structure specific DNA binding, structure-specific DNA binding
External URL
Genes	SOX10 FOXO3 ZNF268 PRDM13 TCF4 YAF2 ATM MLLT10 GSC2 RPS3 CERS3 HNRNPDL RAD51D AEBP2 PHF5A RC3H2 RPL7 PUF60 AKAP9 CRAMP1 DNASE1L1 SERPINA3 NFYB BRPF1 RARB MUS81 ZNF738 PRM2 PMS2 TRIM27 QRICH1 SPHK1 SWAP70 MYT1 ATXN1L C1D MLF1 POLR2C TCEA2 IRF3 PHF20 DNASE2 NFRKB HMGA1 FAM170A EDF1 DDX11 WDR48 SP100 ZNF219 ETV5 PPP1R8 CALR GTF3C5 TIPIN CTCFL HELZ2 CEBPB CENPW H2BC11 NR1H3 WDR76 ERG ZNF654 GTF3A MYCL TSG101 KIF4A PPARGC1A GTF3C3 HOMEZ RFC1 ORC1 LEP NR5A1 JPH2 ZNF235 NONO SLFN11 NDN H2BK1 G3BP1 ERVK-18 TAF6 TSN POLA1 DHX58 CERS6 KLF12 ZNF222 SIM1 BTAF1 ZFPL1 ZFP36 THAP2 SPO11 LRRFIP1 H2BW2 ETS1 SPEN MTF2 HLF CHD7 IMPDH2 BRCA1 H2BC9 hbo1-5.3_human PATZ1 DDX3Y ARID5B PHF6 SLPI THRAP3 SREBF1 POLM SCX ZNF124 ZHX2 POLR1E SETX MSL3 TBX22 SMYD1 GTF3C4 TRIM21 FOXP3 H2AL1Q CDKN2A BEND7 SYCP1 TRNP1 RBM5 CENPC ZBTB16 HNF4A SAMD1 YBX2 MACROH2A1 ARID4A DNTT TPRXL JRKL ZNF43 STRBP DNASE1L3 E2F2 FAAP24 PREB JARID2 WDHD1 MBD3 MT-RNR1 H3C1 THAP9 NR2C1 SAP30L THAP8 LIN9 XRCC4 ZNF7 KHDRBS1 MCM3 MBD4 ZNF285 HOXA13 SMAD3 MECP2 MAJIN TFCP2 CENPA SP140 POLR1B ATAD5 MED6 TBX2 MEIS2 POLA2 ZNF45 POLR3H DEDD TIGD5 LTF MCM7 DFFB MGC35212 NR1H2 ZNF239 BAP18 RAD52 HMG20A ZHX3 TIMELESS THAP4 CEBPG ZFP36L1 MAPK1 RNF6 ESR2 DNMT3B HOXD13 GATA4 EXO1 THAP3 CERS4 DBX2 ERCC1 TAF13 ZDHHC1 ZNF593 RFC3 NUCB2 KMT2D GTF2E2 SHPRH ASXL1 TAF4B SECISBP2 IRF2 ZNF223 FBXO21 ZMYM6 ZNF395 POLN SAP30 MEIS1 HESX1 PHF19 KHSRP DNASE1L2 ADNP2 NOSTRIN ZNF385A THAP7 FOXO4 ZNF207 ZNF826P NRL PARP4 NUCB1 PCGF2 POLG SMARCA5 fcn2-masp1_human MGMT H4C1 APP JUNB CEBPA FOXD1 POLE4 POLE2 SSRP1 H2BC12L LIG3 HMGB2 FOXG1 RBM6 H2BC19P hbo1-5.1_human ILF3 DICER1 PMS1 NEUROG1 ZNF618 ZNF783 PROX1 ANG LYAR FOSB ZNF407 BMAL1 RUNX1T1 ZKSCAN3 DDIT3 RAD51C TAL2 TRIM26 ZMAT2 NANOG MYEF2 TREX2 FOXL1 FLYWCH1 ZNF496 BLM TERT IKZF1 colec-masp1_human SCYL1 NABP1 ZBTB40 CEBPZ GTF2IRD2B ZFR DHX9 MBD5 TPRX2 UHRF2 SETBP1 IRF7 BANF1 ETS2 PRIM2 H2AX PDCD2 POLD2 rfx_human NUPR1 TAF1A SRRM1 PPARG ERCC6L2 DDB2 PDS5B ERCC4 FOXA1 ZNF827 CBX2 SON MSH4 SMAD2 TIGD2 ERVK-7 BEND2 SUPT6H hspt4_hspt5_human RAG1 ARID3A DNASE1 GCFC2 E2F4 TADA2A REDIC1 ARHGAP35 RNF4 mbd3/nurd_human DOT1L SP140L TP53 SRCAP PTF1A CHD3 H3-7 MYT1L PCBP4 EP300 HNF1A DEDD2 ZNF214 SOX12 FOXE3 ZNF155 KAT6A ZNF462 PAGE4 ZNF488 GLI1 TBX5 LEF1 ZBTB44 RDM1 ZNF329 BCLAF3 RABGEF1 NFYA KDM5A CENPS TMF1 ZNF652 DBX1 hbo1-4.2_human TOP2A ZIC2 H2BW1 IFIH1 H2BC10 GTF2F2 KDM5B POU2AF3 YBX1 TAF9 ZNF777 TRIM33 EME2 ZNF688 CCNT1 SIN3A MTF1 TCF20 H2AC4 RMI2 TTC5 TBX4 NFE2 ZBTB6 DDX20 CCDC25 MSH2 ASXL2 ZNF8 HP1BP3 ZBTB47 ZBTB18 RAD50 H4C7 MEIOSIN FAAP100 ZMYM4 APEX1 DDX12P PNN GTF3C2 CHD4 PRM1 LCOR LIG1 ZNF414 SOX2 NUP153 OASL ZFAND6 FANCI TRIM28 ERVK-8 ERVK-11 NANOGNB OTUD7B THRB ZFPM1 BCLAF1 TIGD1 POGK SETMAR DMC1 ZNF800 TOP1MT PPP1R10 NR4A2 SNAPC4 CGAS H2BN1 TOP1 PDCD5 ZIC4 DSCC1 TRIM16 MBD6 PIN4 GTF2F1 FUS SOHLH1 RFX2 HES1 TNP1 AGFG1 HUWE1 NCOR2 ZBED5 H2BC20P TAF15 ERCC3 MKI67 HIVEP2 THOC1 KIF22 RAD51B H2AC25 AKAP8L RLF NCBP2 PARP1 ZNF512 ATXN1 POLE SMARCA2 SIDT2 PML NPAS2 PGR LIG4 AIFM2 SMARCA4 CHD6 PIAS2 XRCC6 HNRNPA1 ARID1A XBP1 ZNF775 ZIM2 H2BC1 H2BC18 PHF1 MRE11 ZNF234 PBRM1 ZNF35 NUFIP1 RFX3 BAZ2B ACR ZNF469 LUC7L3 TET1 SARNP DNMT1 SMARCAD1 IER2 MYC PRDM10 RFC4 ARID3B ENDOV SOX3 THAP6 TSHZ3 TCF7L1 GTF3C1 TSHZ1 COLEC11 DNMT3L RECQL5 SMARCA1 CR2 SYCP3 H2BC5 CRY2 PTGES2 TLR8 ZNF532 POLD1 NABP2 ZNF781 MORC3 ZNF507 RAD21 PRDM12 RNF11 MYSM1 POGZ TCEA3 CDK9 ZNF511 GCM2 HSF1 STAT3 TBPL2 H2BC15 SETDB2 GTF2A1 ZZZ3 THAP12 PPARD XRCC5 NFATC2 DENND4A QKI hbo1-4.3_human GTF2IRD2 HERVK_113 CREBL2 ZNF233 RPS15 RYBP ERCC6L FOXJ1 LENEP HMGN1 PALB2 ASH1L NUSAP1 POLR3A APLP2 ZHX1 POLR1A H3Y2 POU3F2 AHR ASCL3 OTUD7A SNAPC3 TSHZ2 BARX2 TCFL5 POLR2J ASXL3 MLX ZNF230 MLXIPL LYL1 WRNIP1 fact_human KMT2C TFAP2A UIMC1 IMPDH1 PUM3 CDT1 EOMES ZNF341 ZMAT4 MCM2 ILF2 TDG HELQ MAP1S ZNF687 CHTF8 FLI1 HLTF ZFAND3 TFPT ZC3H3 RTEL1 EME1 SPZ1 GLYR1 CREM ARID2 HES7 DMBX1 TP63 ELK4 GPBP1 ALX4 CHTF18 ZNF576 hbo1-5.2_human ZNF84 ISL2 ZNF22 IGHMBP2 HMGXB3 KLLN DDX1 POLR2B LBR fcn2-masp2_human ZNF592 JUN ZNF818P MCMDC2 POLR2J2 SOD2 DTD1 POU5F1 POLR2L MAPT DRAP1 TET2 H2BC3 POLR3B SFPQ POLR2J3 TIGD3 VDR ZFAND5 CARF ABL1 H2BC13 KLF2 H3-4 IRF6 EGR1 CENPT EP400 CENPBD1P H3C13 RORA SP7 TOPORS PBX1 CLOCK TARDBP ZBED3 RHOXF1 DCANP1 PLAGL1 PRM3 INO80 SET HINFP NFILZ DNAJC1 H2BC17 MAFA PHC2 FOXF2 EXO5 HJURP SMC1B ADAR NR6A1 PAXBP1 POU2F1 DLX3 GATA1 TAF1L POLR1D CAMSAP3 GTF2A1L ORC6 APEX2 HNRNPU CHD9 PRDM8 NKX2-1 IFT57 SMAD4 HEMK1 BAZ1A TOP2B SEBOX DR1 EXOSC5 ARID3C ARID4B TMEM18 ZNF513 WRN RARG MIS18BP1 ERVK-6 DNAJB6 RAD51AP1 ZBTB32 TAF10 MYO18A FOXF1 GPBP1L1 ZBTB7A NR4A1 ZC3H12A PHF21A SMCHD1 ALB GTF2I TFAP4 DEK TFAP2B UBN1 TFB1M NFIB GATA3 MAX NAT14 BEND6 SP110 SMARCB1 ATR ZBP1 EEPD1 VPS72 ZMAT1 HNRNPK SYCP2 CRY1 MECOM ARID1B SIM2 HIC2 BEND5 SPATA24 THAP11 TBX6 AHCTF1 FOXH1 TSNAX TCF3 TAF4 CDC5L TINF2 POLDIP2 KDM5C RAD54B KDM5D FEN1 ERVK-19 FOXS1 H2BC21 CERS2 FOXC1 PPARA ZNF146 SNRPA H2BC14 PAX6 CREBZF PARPBP pcna_human-1 CHD5 LDB1 RELA PQBP1 AIFM1 HMG20B TIGD7 TIGD6 POLR1C TAF1D BANP SOX6 EHF ABT1 TNP2 NME2 SOX15 KAT6B LCORL BEND4 PHC3 ZNF350 CHD1 ZFP64 ERVK-25 SETDB1 POLR2F CENPX ZNF326 HOXB1 RAD54L2 TCEA1 H2BC12 GTF3C6 JRK ATF4 RFC2 TRERF1 POLR3D CIITA RPS27 ZBTB8B MIDEAS NKX6-2 CRLF3 MTERF2 ERVK-10 MBD1 FOXP2 FOXA2 colec-masp2_human FOXL2 YY1 TOP3A OTP EZH1 HMGXB4 TOP3B POLR2E LEMD3 TAF6L NR4A3 SUPV3L1 ZNF702P TOPBP1 SOX21 SP1 MLLT3 PAX8 dpol-gamma_human SMUG1 ZNF653 ZNF542P DDB1 CERS5 KIN IRF1 EEF1D SMC1A H2BC26 RPAP1 BANF2 CENPB SPTY2D1 NKX2-5 TERF1 ZBTB3 TTF1 ZNF675 PHC1 ZBTB22 TFAP2C ZFPM2 DDX11L8 SRY THAP5 PIAS4 ZMYM3 AKNA KDM2B DDX3X SURF6 TEAD1 ZBTB42 PLSCR1 GCM1 SOX13 RPL6 DNA2 TMPO RFC5 ING2 hbo1-4.1_human ANKRD1 POLL NR5A2 TIGD4 REV3L HOXA5 POLR2K TTF2 E2F1 DNTTIP1 TIAL1 SIX1 HOPX PAX2 SOX8 SLX4 SRRT CHD8 TAF12 NFE2L2 ERCC6 CHD2 NFYC POLR2A KIF4B CHRAC1 ARID5A SOX1 HMX1 ZNF292 NACA PEG10 RPSA RTF2 RBPJ POU2AF1 ZNF3 TCF25 PAX4 DNMT3A TNFAIP3 MYCN BRIP1

DNA binding

I. Literature review