SOX21 | OmnibusX

Name	Number of supported studies	Average coverage
oligodendrocyte precursor cell	3 studies	17% ± 1%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of SOX21 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	94%	796.07	2471 / 2642	99%	55.83	696 / 705
esophagus	38%	450.46	543 / 1445	49%	15.24	90 / 183
stomach	64%	737.38	230 / 359	17%	3.70	48 / 286
tonsil	0%	0	0 / 0	78%	26.49	35 / 45
skin	72%	1343.37	1296 / 1809	2%	0.55	11 / 472
lung	2%	4.65	11 / 578	46%	16.10	530 / 1155
uterus	1%	4.44	2 / 170	46%	12.50	212 / 459
pancreas	0%	0	0 / 328	43%	5.69	77 / 178
bladder	0%	0	0 / 21	22%	5.32	113 / 504
prostate	7%	17.33	18 / 245	6%	0.70	28 / 502
intestine	0%	0.74	1 / 966	10%	2.40	51 / 527
ovary	0%	0	0 / 180	4%	1.04	16 / 430
liver	0%	0	0 / 226	2%	0.31	8 / 406
thymus	0%	0	0 / 653	0%	0.09	3 / 605
breast	0%	0	0 / 459	0%	0.05	5 / 1118
adrenal gland	0%	0	0 / 258	0%	0.03	1 / 230
adipose	0%	4.57	5 / 1204	0%	0	0 / 0
kidney	0%	0	0 / 89	0%	0.02	2 / 901
muscle	0%	0.24	1 / 803	0%	0	0 / 0
blood vessel	0%	1.01	1 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007420	Biological process	brain development
GO_0030182	Biological process	neuron differentiation
GO_0048863	Biological process	stem cell differentiation
GO_0000122	Biological process	negative regulation of transcription by RNA polymerase II
GO_0006355	Biological process	regulation of DNA-templated transcription
GO_0001942	Biological process	hair follicle development
GO_0045944	Biological process	positive regulation of transcription by RNA polymerase II
GO_0006357	Biological process	regulation of transcription by RNA polymerase II
GO_0005575	Cellular component	cellular_component
GO_0000785	Cellular component	chromatin
GO_0005634	Cellular component	nucleus
GO_0003677	Molecular function	DNA binding
GO_0000978	Molecular function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO_0001228	Molecular function	DNA-binding transcription activator activity, RNA polymerase II-specific
GO_0003700	Molecular function	DNA-binding transcription factor activity
GO_0000981	Molecular function	DNA-binding transcription factor activity, RNA polymerase II-specific

Gene name	SOX21
Protein name	Transcription factor SOX-21 (SOX-A)
Synonyms	SOX25 SOXA
Description	FUNCTION: May play a role as an activator of transcription of OPRM1. Overexpression of SOX21 can up-regulate the OPRM1 distal promoter activity in mor-expressing neuronal cells. May play a role in ameloblast differentiation. .
Accessions	Q9Y651 ENST00000376945.4

SOX21 report