Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 3244.57 | 258 / 258 | 100% | 32.02 | 230 / 230 |
esophagus | 100% | 6322.56 | 1445 / 1445 | 100% | 84.96 | 183 / 183 |
intestine | 100% | 5281.08 | 966 / 966 | 100% | 53.25 | 527 / 527 |
prostate | 100% | 3733.88 | 245 / 245 | 100% | 33.59 | 502 / 502 |
stomach | 100% | 3282.76 | 359 / 359 | 100% | 64.50 | 286 / 286 |
thymus | 100% | 3483.24 | 652 / 653 | 100% | 34.21 | 605 / 605 |
uterus | 100% | 4268.45 | 170 / 170 | 100% | 32.80 | 457 / 459 |
skin | 100% | 5098.67 | 1808 / 1809 | 100% | 25.85 | 470 / 472 |
ovary | 100% | 2886.56 | 180 / 180 | 99% | 37.10 | 427 / 430 |
breast | 100% | 3269.09 | 459 / 459 | 99% | 34.06 | 1110 / 1118 |
bladder | 100% | 4497.05 | 21 / 21 | 99% | 35.69 | 500 / 504 |
brain | 99% | 5476.95 | 2628 / 2642 | 99% | 22.94 | 701 / 705 |
liver | 100% | 2060.91 | 226 / 226 | 99% | 18.11 | 401 / 406 |
lung | 100% | 3498.63 | 577 / 578 | 99% | 33.34 | 1141 / 1155 |
kidney | 99% | 2340.61 | 88 / 89 | 99% | 26.06 | 896 / 901 |
pancreas | 93% | 1314.44 | 306 / 328 | 100% | 42.10 | 178 / 178 |
adipose | 100% | 3567.17 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4968.94 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 23.76 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 27.71 | 29 / 29 |
muscle | 100% | 4267.90 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3485.71 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 41.90 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 27.71 | 1 / 1 |
heart | 98% | 2167.89 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 2581.66 | 898 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006325 | Biological process | chromatin organization |
GO_2000677 | Biological process | regulation of transcription regulatory region DNA binding |
GO_0030512 | Biological process | negative regulation of transforming growth factor beta receptor signaling pathway |
GO_0043249 | Biological process | erythrocyte maturation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0000381 | Biological process | regulation of alternative mRNA splicing, via spliceosome |
GO_0006110 | Biological process | regulation of glycolytic process |
GO_0006338 | Biological process | chromatin remodeling |
GO_0097680 | Biological process | double-strand break repair via classical nonhomologous end joining |
GO_0051092 | Biological process | positive regulation of NF-kappaB transcription factor activity |
GO_0006351 | Biological process | DNA-templated transcription |
GO_0042981 | Biological process | regulation of apoptotic process |
GO_0034504 | Biological process | protein localization to nucleus |
GO_0060766 | Biological process | negative regulation of androgen receptor signaling pathway |
GO_0051090 | Biological process | regulation of DNA-binding transcription factor activity |
GO_0045746 | Biological process | negative regulation of Notch signaling pathway |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0030183 | Biological process | B cell differentiation |
GO_0045444 | Biological process | fat cell differentiation |
GO_0070418 | Cellular component | DNA-dependent protein kinase complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0035861 | Cellular component | site of double-strand break |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0140297 | Molecular function | DNA-binding transcription factor binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0046332 | Molecular function | SMAD binding |
GO_0001222 | Molecular function | transcription corepressor binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0035035 | Molecular function | histone acetyltransferase binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0050681 | Molecular function | nuclear androgen receptor binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ZBTB7A |
Protein name | Alternative protein ZBTB7A ZBTB7A protein (Zinc finger and BTB domain containing 7A, isoform CRA_a) Zinc finger and BTB domain-containing protein 7A (Factor binding IST protein 1) (FBI-1) (Factor that binds to inducer of short transcripts protein 1) (HIV-1 1st-binding protein 1) (Leukemia/lymphoma-related factor) (POZ and Krueppel erythroid myeloid ontogenic factor) (POK erythroid myeloid ontogenic factor) (Pokemon) (Pokemon 1) (TTF-I-interacting peptide 21) (TIP21) (Zinc finger protein 857A) |
Synonyms | FBI1 LRF hCG_2004107 ZNF857A ZBTB7 |
Description | FUNCTION: Transcription factor that represses the transcription of a wide range of genes involved in cell proliferation and differentiation . Directly and specifically binds to the consensus sequence 5'-[GA][CA]GACCCCCCCCC-3' and represses transcription both by regulating the organization of chromatin and through the direct recruitment of transcription factors to gene regulatory regions . Negatively regulates SMAD4 transcriptional activity in the TGF-beta signaling pathway through these two mechanisms . That is, recruits the chromatin regulator HDAC1 to the SMAD4-DNA complex and in parallel prevents the recruitment of the transcriptional activators CREBBP and EP300 . Collaborates with transcription factors like RELA to modify the accessibility of gene transcription regulatory regions to secondary transcription factors (By similarity). Also directly interacts with transcription factors like SP1 to prevent their binding to DNA . Functions as an androgen receptor/AR transcriptional corepressor by recruiting NCOR1 and NCOR2 to the androgen response elements/ARE on target genes . Thereby, negatively regulates androgen receptor signaling and androgen-induced cell proliferation . Involved in the switch between fetal and adult globin expression during erythroid cells maturation . Through its interaction with the NuRD complex regulates chromatin at the fetal globin genes to repress their transcription . Specifically represses the transcription of the tumor suppressor ARF isoform from the CDKN2A gene (By similarity). Efficiently abrogates E2F1-dependent CDKN2A transactivation (By similarity). Regulates chondrogenesis through the transcriptional repression of specific genes via a mechanism that also requires histone deacetylation (By similarity). Regulates cell proliferation through the transcriptional regulation of genes involved in glycolysis . Involved in adipogenesis through the regulation of genes involved in adipocyte differentiation . Plays a key role in the differentiation of lymphoid progenitors into B and T lineages (By similarity). Promotes differentiation towards the B lineage by inhibiting the T-cell instructive Notch signaling pathway through the specific transcriptional repression of Notch downstream target genes (By similarity). Also regulates osteoclast differentiation (By similarity). May also play a role, independently of its transcriptional activity, in double-strand break repair via classical non-homologous end joining/cNHEJ (By similarity). Recruited to double-strand break sites on damage DNA, interacts with the DNA-dependent protein kinase complex and directly regulates its stability and activity in DNA repair (By similarity). May also modulate the splicing activity of KHDRBS1 toward BCL2L1 in a mechanism which is histone deacetylase-dependent and thereby negatively regulates the pro-apoptotic effect of KHDRBS1 . . |
Accessions | ENST00000322357.9 ENST00000601588.1 O95365 L8E8Q6 Q8TB76 |