Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 6 studies | 20% ± 4% | |
| glutamatergic neuron | 4 studies | 40% ± 22% | |
| epithelial cell | 3 studies | 17% ± 1% | |
| retinal pigment epithelial cell | 3 studies | 28% ± 6% | |
| astrocyte | 3 studies | 26% ± 1% | |
| neuron | 3 studies | 21% ± 8% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 36% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 5117.90 | 1445 / 1445 | 100% | 17.95 | 183 / 183 |
| brain | 100% | 6230.62 | 2638 / 2642 | 100% | 28.14 | 705 / 705 |
| thymus | 100% | 6153.00 | 653 / 653 | 100% | 20.62 | 604 / 605 |
| skin | 100% | 5671.01 | 1809 / 1809 | 100% | 29.37 | 470 / 472 |
| uterus | 100% | 6353.67 | 170 / 170 | 100% | 19.00 | 457 / 459 |
| kidney | 100% | 4183.33 | 89 / 89 | 99% | 19.55 | 896 / 901 |
| prostate | 100% | 6726.71 | 245 / 245 | 99% | 18.61 | 499 / 502 |
| adrenal gland | 100% | 4540.64 | 258 / 258 | 99% | 23.03 | 228 / 230 |
| intestine | 100% | 5288.59 | 966 / 966 | 98% | 11.89 | 518 / 527 |
| bladder | 100% | 6413.43 | 21 / 21 | 98% | 14.48 | 494 / 504 |
| breast | 100% | 5323.02 | 459 / 459 | 98% | 14.71 | 1095 / 1118 |
| lung | 100% | 5187.20 | 577 / 578 | 98% | 16.17 | 1133 / 1155 |
| ovary | 100% | 6856.76 | 180 / 180 | 96% | 10.75 | 414 / 430 |
| stomach | 99% | 3632.19 | 355 / 359 | 97% | 11.97 | 278 / 286 |
| pancreas | 93% | 1947.47 | 305 / 328 | 99% | 15.10 | 176 / 178 |
| liver | 87% | 1654.21 | 197 / 226 | 87% | 8.40 | 355 / 406 |
| adipose | 100% | 5127.16 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 61.44 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 13.83 | 29 / 29 |
| spleen | 100% | 7513.38 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 21.41 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 7.42 | 1 / 1 |
| blood vessel | 100% | 5770.34 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 4917.10 | 799 / 803 | 0% | 0 | 0 / 0 |
| heart | 99% | 3599.64 | 851 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 84% | 2222.21 | 783 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006974 | Biological process | DNA damage response |
| GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
| GO_0016604 | Cellular component | nuclear body |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0005721 | Cellular component | pericentric heterochromatin |
| GO_0005667 | Cellular component | transcription regulator complex |
| GO_0003677 | Molecular function | DNA binding |
| GO_0001223 | Molecular function | transcription coactivator binding |
| GO_0003714 | Molecular function | transcription corepressor activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | FLYWCH1 |
| Protein name | FLYWCH-type zinc finger 1 FLYWCH-type zinc finger-containing protein 1 |
| Synonyms | KIAA1552 |
| Description | FUNCTION: Transcription cofactor . Negatively regulates transcription activation by catenin beta-1 CTNNB1, perhaps acting by competing with TCF4 for CTNNB1 binding . May play a role in DNA-damage response signaling . Binds specifically to DNA sequences at peri-centromeric chromatin loci. . |
| Accessions | ENST00000571983.5 ENST00000573564.5 I3L231 ENST00000570425.5 ENST00000571580.1 J3KNW1 I3L0R3 ENST00000416288.6 [Q4VC44-2] ENST00000344592.9 I3L1A7 I3L4V9 I3L188 I3L287 ENST00000575679.1 ENST00000253928.14 [Q4VC44-1] ENST00000573525.1 Q4VC44 |