Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 4 studies | 22% ± 4% | |
glutamatergic neuron | 3 studies | 27% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 22% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 883.64 | 459 / 459 | 100% | 20.05 | 1118 / 1118 |
ovary | 100% | 905.59 | 180 / 180 | 100% | 18.18 | 429 / 430 |
skin | 100% | 1075.53 | 1807 / 1809 | 100% | 21.88 | 471 / 472 |
esophagus | 100% | 793.94 | 1440 / 1445 | 100% | 19.88 | 183 / 183 |
thymus | 100% | 1172.51 | 653 / 653 | 99% | 18.80 | 601 / 605 |
uterus | 100% | 803.84 | 170 / 170 | 99% | 15.63 | 453 / 459 |
intestine | 99% | 778.92 | 957 / 966 | 99% | 17.46 | 524 / 527 |
prostate | 99% | 649.40 | 243 / 245 | 99% | 10.14 | 498 / 502 |
brain | 100% | 2609.00 | 2641 / 2642 | 98% | 19.51 | 693 / 705 |
bladder | 100% | 877.90 | 21 / 21 | 98% | 13.67 | 492 / 504 |
lung | 94% | 470.07 | 542 / 578 | 99% | 13.93 | 1143 / 1155 |
kidney | 92% | 475.92 | 82 / 89 | 97% | 9.11 | 871 / 901 |
stomach | 87% | 485.26 | 312 / 359 | 99% | 18.93 | 284 / 286 |
pancreas | 77% | 281.02 | 253 / 328 | 99% | 9.85 | 176 / 178 |
adrenal gland | 95% | 479.06 | 244 / 258 | 80% | 6.85 | 184 / 230 |
liver | 80% | 276.00 | 181 / 226 | 92% | 7.42 | 372 / 406 |
adipose | 100% | 819.51 | 1204 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.15 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.47 | 1 / 1 |
spleen | 100% | 472.72 | 240 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 736.62 | 1329 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 20.98 | 79 / 80 |
lymph node | 0% | 0 | 0 / 0 | 90% | 11.34 | 26 / 29 |
muscle | 88% | 389.25 | 705 / 803 | 0% | 0 | 0 / 0 |
heart | 87% | 402.54 | 750 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 48% | 298.43 | 448 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0007283 | Biological process | spermatogenesis |
GO_0045595 | Biological process | regulation of cell differentiation |
GO_0030154 | Biological process | cell differentiation |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0042127 | Biological process | regulation of cell population proliferation |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0001673 | Cellular component | male germ cell nucleus |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0046983 | Molecular function | protein dimerization activity |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | TCFL5 |
Protein name | Transcription factor like 5 Transcription factor-like 5 protein (Cha transcription factor) (HPV-16 E2-binding protein 1) (E2BP-1) |
Synonyms | E2BP1 CHA |
Description | FUNCTION: Putative transcription factor. Isoform 3 may play a role in early spermatogenesis. . |
Accessions | F8W9A4 Q9UL49 ENST00000217162.5 ENST00000335351.8 [Q9UL49-3] |