Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 24% ± 7% |
Insufficient scRNA-seq data for expression of GTF3C4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1871.21 | 1445 / 1445 | 100% | 25.37 | 183 / 183 |
breast | 100% | 1722.88 | 459 / 459 | 100% | 29.98 | 1117 / 1118 |
intestine | 100% | 1745.09 | 966 / 966 | 100% | 17.53 | 525 / 527 |
prostate | 100% | 1687.83 | 245 / 245 | 100% | 19.00 | 500 / 502 |
lung | 99% | 1467.89 | 573 / 578 | 100% | 18.32 | 1154 / 1155 |
stomach | 100% | 1431.62 | 358 / 359 | 99% | 18.21 | 284 / 286 |
thymus | 100% | 2220.76 | 653 / 653 | 99% | 17.17 | 597 / 605 |
brain | 99% | 1635.81 | 2610 / 2642 | 100% | 23.26 | 704 / 705 |
ovary | 100% | 2006.14 | 180 / 180 | 99% | 15.13 | 424 / 430 |
uterus | 100% | 1882.64 | 170 / 170 | 98% | 18.60 | 452 / 459 |
bladder | 100% | 1678.48 | 21 / 21 | 97% | 14.43 | 490 / 504 |
skin | 100% | 3476.45 | 1809 / 1809 | 96% | 17.08 | 455 / 472 |
pancreas | 97% | 986.77 | 318 / 328 | 99% | 13.16 | 176 / 178 |
kidney | 100% | 1103.62 | 89 / 89 | 92% | 12.12 | 833 / 901 |
adrenal gland | 100% | 1681.16 | 258 / 258 | 90% | 10.72 | 206 / 230 |
liver | 100% | 831.00 | 225 / 226 | 64% | 5.27 | 259 / 406 |
adipose | 100% | 1512.31 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 11.79 | 29 / 29 |
spleen | 100% | 1279.21 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 22.77 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.13 | 1 / 1 |
muscle | 100% | 1514.68 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1252.63 | 1325 / 1335 | 0% | 0 | 0 / 0 |
heart | 94% | 989.73 | 806 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 9.00 | 71 / 80 |
peripheral blood | 35% | 908.66 | 323 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006384 | Biological process | transcription initiation at RNA polymerase III promoter |
GO_0042797 | Biological process | tRNA transcription by RNA polymerase III |
GO_0042791 | Biological process | 5S class rRNA transcription by RNA polymerase III |
GO_0006338 | Biological process | chromatin remodeling |
GO_0006383 | Biological process | transcription by RNA polymerase III |
GO_0000127 | Cellular component | transcription factor TFIIIC complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0003677 | Molecular function | DNA binding |
GO_0008047 | Molecular function | enzyme activator activity |
GO_0004402 | Molecular function | histone acetyltransferase activity |
GO_0000995 | Molecular function | RNA polymerase III general transcription initiation factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | GTF3C4 |
Protein name | General transcription factor IIIC subunit 4 GTF3C4 protein General transcription factor 3C polypeptide 4 (EC 2.3.1.48) (TF3C-delta) (Transcription factor IIIC 90 kDa subunit) (TFIIIC 90 kDa subunit) (TFIIIC90) (Transcription factor IIIC subunit delta) |
Synonyms | |
Description | FUNCTION: Essential for RNA polymerase III to make a number of small nuclear and cytoplasmic RNAs, including 5S RNA, tRNA, and adenovirus-associated (VA) RNA of both cellular and viral origin. Has histone acetyltransferase activity (HAT) with unique specificity for free and nucleosomal H3. May cooperate with GTF3C5 in facilitating the recruitment of TFIIIB and RNA polymerase through direct interactions with BRF1, POLR3C and POLR3F. May be localized close to the A box. |
Accessions | ENST00000483873.6 Q9UKN8 Q05CN7 F2Z356 ENST00000372146.5 |