GPBP1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	44 studies	35% ± 13%	Explore
fibroblast	40 studies	32% ± 12%	Explore
B cell	39 studies	40% ± 12%	Explore
natural killer cell	39 studies	35% ± 12%	Explore
T cell	32 studies	34% ± 10%	Explore
pericyte	32 studies	29% ± 12%	Explore
macrophage	29 studies	31% ± 12%	Explore
smooth muscle cell	29 studies	28% ± 8%	Explore
CD4-positive, alpha-beta T cell	29 studies	34% ± 10%	Explore
CD8-positive, alpha-beta T cell	29 studies	33% ± 9%	Explore
regulatory T cell	24 studies	34% ± 10%	Explore
mast cell	21 studies	38% ± 13%	Explore
conventional dendritic cell	21 studies	31% ± 14%	Explore
memory B cell	20 studies	35% ± 10%	Explore
basal cell	20 studies	33% ± 15%	Explore
monocyte	19 studies	31% ± 9%	Explore
ciliated cell	19 studies	41% ± 16%	Explore
naive B cell	19 studies	36% ± 9%	Explore
classical monocyte	18 studies	27% ± 11%	Explore
astrocyte	18 studies	39% ± 17%	Explore
epithelial cell	18 studies	39% ± 22%	Explore
dendritic cell	17 studies	44% ± 19%	Explore
endothelial cell of lymphatic vessel	17 studies	33% ± 11%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	17 studies	32% ± 10%	Explore
mature NK T cell	17 studies	32% ± 8%	Explore
plasmacytoid dendritic cell	16 studies	31% ± 11%	Explore
gamma-delta T cell	16 studies	37% ± 13%	Explore
CD16-positive, CD56-dim natural killer cell, human	15 studies	34% ± 9%	Explore
oligodendrocyte precursor cell	15 studies	39% ± 18%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	34% ± 9%	Explore
capillary endothelial cell	15 studies	24% ± 6%	Explore
oligodendrocyte	15 studies	42% ± 16%	Explore
plasma cell	14 studies	33% ± 9%	Explore
non-classical monocyte	14 studies	30% ± 12%	Explore
myofibroblast cell	14 studies	29% ± 12%	Explore
microglial cell	14 studies	39% ± 12%	Explore
mucosal invariant T cell	14 studies	33% ± 7%	Explore
endothelial cell of vascular tree	14 studies	30% ± 13%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	13 studies	32% ± 10%	Explore
connective tissue cell	13 studies	33% ± 7%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	35% ± 11%	Explore
glutamatergic neuron	12 studies	44% ± 24%	Explore
endothelial cell of artery	12 studies	25% ± 7%	Explore
vein endothelial cell	12 studies	27% ± 13%	Explore
myeloid cell	12 studies	30% ± 11%	Explore
CD4-positive, alpha-beta memory T cell	11 studies	32% ± 11%	Explore
type I pneumocyte	10 studies	34% ± 7%	Explore
secretory cell	10 studies	29% ± 12%	Explore
leukocyte	10 studies	41% ± 13%	Explore
GABAergic neuron	10 studies	42% ± 21%	Explore
effector memory CD8-positive, alpha-beta T cell	10 studies	38% ± 11%	Explore
abnormal cell	10 studies	30% ± 13%	Explore
type II pneumocyte	9 studies	28% ± 9%	Explore
neuron	9 studies	40% ± 19%	Explore
retinal rod cell	9 studies	36% ± 12%	Explore
adipocyte	9 studies	34% ± 9%	Explore
goblet cell	8 studies	31% ± 22%	Explore
mesothelial cell	8 studies	36% ± 16%	Explore
amacrine cell	8 studies	40% ± 16%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	28% ± 12%	Explore
mononuclear phagocyte	7 studies	35% ± 14%	Explore
interneuron	7 studies	45% ± 19%	Explore
innate lymphoid cell	7 studies	38% ± 12%	Explore
club cell	7 studies	36% ± 9%	Explore
retinal cone cell	7 studies	44% ± 19%	Explore
T follicular helper cell	7 studies	36% ± 10%	Explore
plasmablast	6 studies	41% ± 19%	Explore
respiratory goblet cell	6 studies	33% ± 13%	Explore
kidney loop of Henle epithelial cell	6 studies	23% ± 7%	Explore
progenitor cell	6 studies	28% ± 5%	Explore
retinal ganglion cell	6 studies	40% ± 22%	Explore
lymphocyte	6 studies	43% ± 17%	Explore
precursor B cell	6 studies	43% ± 10%	Explore
retina horizontal cell	6 studies	41% ± 11%	Explore
Mueller cell	6 studies	35% ± 10%	Explore
hematopoietic precursor cell	5 studies	35% ± 19%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	34% ± 10%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	26% ± 5%	Explore
renal alpha-intercalated cell	5 studies	28% ± 6%	Explore
retinal bipolar neuron	5 studies	43% ± 17%	Explore
OFF-bipolar cell	5 studies	29% ± 7%	Explore
ON-bipolar cell	5 studies	32% ± 9%	Explore
pro-B cell	5 studies	33% ± 4%	Explore
brush cell	5 studies	31% ± 11%	Explore
cardiac muscle cell	5 studies	33% ± 7%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	42% ± 16%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	29% ± 7%	Explore
deuterosomal cell	4 studies	22% ± 5%	Explore
squamous epithelial cell	4 studies	41% ± 20%	Explore
pancreatic A cell	4 studies	38% ± 13%	Explore
exhausted T cell	4 studies	36% ± 17%	Explore
epithelial cell of proximal tubule	4 studies	21% ± 4%	Explore
IgA plasma cell	4 studies	26% ± 10%	Explore
IgG plasma cell	4 studies	20% ± 4%	Explore
glial cell	4 studies	33% ± 12%	Explore
granule cell	4 studies	34% ± 8%	Explore
immature B cell	4 studies	40% ± 14%	Explore
retinal pigment epithelial cell	4 studies	42% ± 20%	Explore
CD4-positive helper T cell	4 studies	40% ± 17%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	35% ± 8%	Explore
neutrophil	4 studies	22% ± 4%	Explore
hepatocyte	4 studies	47% ± 15%	Explore
granulocyte	4 studies	35% ± 8%	Explore
luminal cell of prostate epithelium	4 studies	32% ± 9%	Explore
hematopoietic stem cell	4 studies	26% ± 4%	Explore
enteroendocrine cell	4 studies	28% ± 12%	Explore
alveolar macrophage	4 studies	32% ± 13%	Explore
transit amplifying cell	4 studies	35% ± 25%	Explore
double negative thymocyte	4 studies	41% ± 11%	Explore
ionocyte	3 studies	34% ± 11%	Explore
type B pancreatic cell	3 studies	38% ± 12%	Explore
glomerular endothelial cell	3 studies	29% ± 5%	Explore
podocyte	3 studies	29% ± 10%	Explore
renal beta-intercalated cell	3 studies	38% ± 8%	Explore
neural crest cell	3 studies	28% ± 2%	Explore
GABAergic interneuron	3 studies	28% ± 3%	Explore
enterocyte	3 studies	17% ± 1%	Explore
serous secreting cell	3 studies	19% ± 3%	Explore
tissue-resident macrophage	3 studies	29% ± 7%	Explore
GABAergic amacrine cell	3 studies	36% ± 10%	Explore
glycinergic amacrine cell	3 studies	33% ± 7%	Explore
rod bipolar cell	3 studies	51% ± 4%	Explore
germinal center B cell	3 studies	30% ± 4%	Explore
muscle cell	3 studies	41% ± 21%	Explore
pancreatic ductal cell	3 studies	40% ± 16%	Explore
neural progenitor cell	3 studies	43% ± 11%	Explore
ependymal cell	3 studies	53% ± 13%	Explore
adventitial cell	3 studies	27% ± 3%	Explore
chondrocyte	3 studies	38% ± 6%	Explore
group 3 innate lymphoid cell	3 studies	50% ± 15%	Explore
Schwann cell	3 studies	32% ± 12%	Explore
melanocyte	3 studies	37% ± 14%	Explore
keratinocyte	3 studies	32% ± 5%	Explore
T-helper 17 cell	3 studies	39% ± 10%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	34% ± 3%	Explore
central memory CD8-positive, alpha-beta T cell	3 studies	27% ± 6%	Explore
myoepithelial cell	3 studies	32% ± 12%	Explore
mural cell	3 studies	46% ± 15%	Explore
mucus secreting cell	3 studies	35% ± 8%	Explore
erythrocyte	3 studies	29% ± 15%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
brain	20 studies	38% ± 19%	Explore
lung	19 studies	32% ± 11%	Explore
peripheral blood	16 studies	31% ± 12%	Explore
eye	11 studies	39% ± 14%	Explore
intestine	10 studies	29% ± 13%	Explore
kidney	9 studies	26% ± 5%	Explore
heart	5 studies	28% ± 6%	Explore
breast	5 studies	31% ± 7%	Explore
liver	5 studies	40% ± 13%	Explore
bone marrow	4 studies	26% ± 6%	Explore
uterus	4 studies	37% ± 14%	Explore
prostate	4 studies	30% ± 8%	Explore
lymph node	4 studies	29% ± 9%	Explore
adipose	4 studies	31% ± 7%	Explore
pancreas	3 studies	38% ± 11%	Explore
skin	3 studies	31% ± 10%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	6229.33	2642 / 2642	100%	66.18	705 / 705
esophagus	100%	4054.58	1445 / 1445	100%	39.23	183 / 183
pancreas	100%	2530.61	328 / 328	100%	43.19	178 / 178
prostate	100%	5607.10	245 / 245	100%	52.08	502 / 502
thymus	100%	5824.03	653 / 653	100%	62.70	605 / 605
uterus	100%	5884.05	170 / 170	100%	53.52	459 / 459
breast	100%	5169.01	459 / 459	100%	69.30	1117 / 1118
lung	100%	5436.85	578 / 578	100%	41.85	1153 / 1155
adrenal gland	100%	5832.28	258 / 258	100%	51.32	229 / 230
liver	100%	2378.97	226 / 226	100%	29.57	404 / 406
bladder	100%	4445.29	21 / 21	99%	41.18	501 / 504
kidney	100%	4522.56	89 / 89	99%	46.80	895 / 901
ovary	100%	7637.45	180 / 180	99%	32.60	426 / 430
intestine	100%	4827.61	966 / 966	99%	37.62	520 / 527
stomach	100%	3603.20	359 / 359	99%	34.68	282 / 286
skin	100%	4329.38	1807 / 1809	96%	44.28	451 / 472
blood vessel	100%	4247.07	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	55.21	29 / 29
muscle	100%	4272.44	803 / 803	0%	0	0 / 0
spleen	100%	5621.98	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	54.09	45 / 45
ureter	0%	0	0 / 0	100%	18.20	1 / 1
adipose	100%	4800.05	1203 / 1204	0%	0	0 / 0
heart	98%	3169.67	848 / 861	0%	0	0 / 0
peripheral blood	94%	3682.27	873 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	88%	25.42	70 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0006351	Biological process	DNA-templated transcription
GO_0006355	Biological process	regulation of DNA-templated transcription
GO_0045944	Biological process	positive regulation of transcription by RNA polymerase II
GO_0043231	Cellular component	intracellular membrane-bounded organelle
GO_0005829	Cellular component	cytosol
GO_0005886	Cellular component	plasma membrane
GO_0005634	Cellular component	nucleus
GO_0003677	Molecular function	DNA binding
GO_0003700	Molecular function	DNA-binding transcription factor activity
GO_0005515	Molecular function	protein binding
GO_0003723	Molecular function	RNA binding

Gene name	GPBP1
Protein name	Vasculin (GC-rich promoter-binding protein 1) (Vascular wall-linked protein) Vasculin (GC-rich promoter-binding protein 1)
Synonyms	hCG_40617 SSH6 GPBP
Description	FUNCTION: Functions as a GC-rich promoter-specific transactivating transcription factor. . FUNCTION: Functions as a GC-rich promoter-specific transactivating transcription factor. .
Accessions	ENST00000264779.6 [Q86WP2-2] ENST00000424459.7 ENST00000506184.7 [Q86WP2-1] ENST00000514387.6 [Q86WP2-4] Q86WP2 D4PHA4 ENST00000511209.5 [Q86WP2-3]

GPBP1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review