Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 29% ± 5% |
Insufficient scRNA-seq data for expression of POLR3D at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1545.64 | 1445 / 1445 | 100% | 16.72 | 183 / 183 |
ovary | 100% | 2056.69 | 180 / 180 | 100% | 13.55 | 430 / 430 |
pancreas | 100% | 1267.96 | 328 / 328 | 100% | 16.46 | 178 / 178 |
stomach | 100% | 1181.31 | 359 / 359 | 100% | 15.61 | 286 / 286 |
lung | 100% | 1587.50 | 578 / 578 | 100% | 16.83 | 1154 / 1155 |
intestine | 100% | 1459.33 | 966 / 966 | 100% | 16.21 | 526 / 527 |
prostate | 100% | 1671.60 | 245 / 245 | 100% | 13.55 | 501 / 502 |
skin | 100% | 1987.22 | 1809 / 1809 | 100% | 34.45 | 471 / 472 |
breast | 100% | 1596.27 | 459 / 459 | 100% | 16.91 | 1115 / 1118 |
uterus | 100% | 1750.52 | 170 / 170 | 100% | 18.56 | 457 / 459 |
thymus | 100% | 1592.17 | 653 / 653 | 99% | 15.60 | 601 / 605 |
bladder | 100% | 1932.86 | 21 / 21 | 99% | 15.46 | 500 / 504 |
brain | 99% | 825.09 | 2608 / 2642 | 100% | 22.10 | 705 / 705 |
kidney | 100% | 1179.43 | 89 / 89 | 98% | 13.05 | 886 / 901 |
adrenal gland | 100% | 1462.31 | 258 / 258 | 95% | 12.59 | 218 / 230 |
liver | 98% | 627.73 | 222 / 226 | 69% | 5.42 | 279 / 406 |
adipose | 100% | 1691.06 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1535.75 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 21.33 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.62 | 29 / 29 |
muscle | 100% | 2369.92 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1467.16 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.22 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.95 | 1 / 1 |
heart | 98% | 1113.61 | 847 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 67% | 959.14 | 620 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051607 | Biological process | defense response to virus |
GO_0032728 | Biological process | positive regulation of interferon-beta production |
GO_0042797 | Biological process | tRNA transcription by RNA polymerase III |
GO_0045089 | Biological process | positive regulation of innate immune response |
GO_0045087 | Biological process | innate immune response |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005666 | Cellular component | RNA polymerase III complex |
GO_0003677 | Molecular function | DNA binding |
GO_0003682 | Molecular function | chromatin binding |
Gene name | POLR3D |
Protein name | RNA polymerase III subunit D DNA-directed RNA polymerase III subunit RPC4 (RNA polymerase III subunit C4) (DNA-directed RNA polymerase III subunit D) (Protein BN51) (RNA polymerase III 47 kDa subunit) (RPC53 homolog) |
Synonyms | BN51T BN51 |
Description | FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates . Specific peripheric component of RNA polymerase III (Pol III) which synthesizes small non-coding RNAs including 5S rRNA, snRNAs, tRNAs and miRNAs from at least 500 distinct genomic loci. Assembles with POLR3E/RPC5 forming a subcomplex that binds the Pol III core. Enables recruitment of Pol III at transcription initiation site and drives transcription initiation from both type 2 and type 3 DNA promoters. Required for efficient transcription termination and reinitiation (By similarity). Pol III plays a key role in sensing and limiting infection by intracellular bacteria and DNA viruses. Acts as nuclear and cytosolic DNA sensor involved in innate immune response. Can sense non-self dsDNA that serves as template for transcription into dsRNA. The non-self RNA polymerase III transcripts, such as Epstein-Barr virus-encoded RNAs (EBERs) induce type I interferon and NF-kappa-B through the RIG-I pathway . . |
Accessions | ENST00000518039.1 E5RHT4 P05423 ENST00000306433.9 E7EQ68 ENST00000397802.8 ENST00000519237.5 |