Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2527.16 | 1445 / 1445 | 100% | 13.14 | 183 / 183 |
brain | 100% | 3165.39 | 2641 / 2642 | 100% | 12.63 | 705 / 705 |
breast | 100% | 3216.85 | 459 / 459 | 100% | 11.78 | 1116 / 1118 |
ovary | 100% | 3980.79 | 180 / 180 | 100% | 7.54 | 429 / 430 |
bladder | 100% | 2670.24 | 21 / 21 | 100% | 9.71 | 502 / 504 |
prostate | 100% | 2700.04 | 245 / 245 | 100% | 8.64 | 500 / 502 |
uterus | 100% | 3473.69 | 170 / 170 | 100% | 12.29 | 457 / 459 |
lung | 100% | 2483.76 | 576 / 578 | 100% | 9.56 | 1152 / 1155 |
stomach | 100% | 2131.05 | 359 / 359 | 99% | 10.87 | 284 / 286 |
thymus | 100% | 3013.98 | 653 / 653 | 99% | 9.09 | 600 / 605 |
intestine | 100% | 3107.64 | 966 / 966 | 99% | 10.55 | 522 / 527 |
pancreas | 100% | 2455.15 | 328 / 328 | 99% | 8.15 | 176 / 178 |
skin | 100% | 2866.54 | 1809 / 1809 | 97% | 10.39 | 459 / 472 |
kidney | 100% | 1839.34 | 89 / 89 | 97% | 7.34 | 872 / 901 |
adrenal gland | 100% | 2352.71 | 258 / 258 | 96% | 5.32 | 221 / 230 |
liver | 100% | 1740.69 | 226 / 226 | 89% | 4.49 | 361 / 406 |
adipose | 100% | 2746.32 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 6.95 | 29 / 29 |
spleen | 100% | 2296.51 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.27 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.83 | 1 / 1 |
blood vessel | 100% | 2149.15 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1634.52 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1431.99 | 837 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 76% | 5.69 | 61 / 80 |
peripheral blood | 39% | 763.31 | 362 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043484 | Biological process | regulation of RNA splicing |
GO_0008380 | Biological process | RNA splicing |
GO_0006397 | Biological process | mRNA processing |
GO_0032784 | Biological process | regulation of DNA-templated transcription elongation |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0016363 | Cellular component | nuclear matrix |
GO_0005654 | Cellular component | nucleoplasm |
GO_0044609 | Cellular component | DBIRD complex |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0000993 | Molecular function | RNA polymerase II complex binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003723 | Molecular function | RNA binding |
Gene name | ZNF326 |
Protein name | Zinc finger protein 326 DBIRD complex subunit ZNF326 (Zinc finger protein 326) (Zinc finger protein interacting with mRNPs and DBC1) DBIRD complex subunit ZNF326 (Zinc finger protein 326) |
Synonyms | ZIRD hCG_22859 |
Description | FUNCTION: Core component of the DBIRD complex, a multiprotein complex that acts at the interface between core mRNP particles and RNA polymerase II (RNAPII) and integrates transcript elongation with the regulation of alternative splicing: the DBIRD complex affects local transcript elongation rates and alternative splicing of a large set of exons embedded in (A + T)-rich DNA regions. May play a role in neuronal differentiation and is able to bind DNA and activate expression in vitro. . |
Accessions | Q5BKZ1 ENST00000361911.9 [Q5BKZ1-2] ENST00000370447.3 A0A0A0MRN4 ENST00000394583.7 E2QRN4 ENST00000340281.9 [Q5BKZ1-1] |