Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 18 studies | 56% ± 22% | |
endothelial cell | 16 studies | 31% ± 9% | |
oligodendrocyte | 13 studies | 38% ± 13% | |
oligodendrocyte precursor cell | 13 studies | 41% ± 20% | |
glutamatergic neuron | 10 studies | 44% ± 26% | |
fibroblast | 10 studies | 28% ± 9% | |
adipocyte | 9 studies | 27% ± 11% | |
GABAergic neuron | 8 studies | 47% ± 22% | |
pericyte | 5 studies | 20% ± 3% | |
endothelial cell of lymphatic vessel | 5 studies | 25% ± 6% | |
type I pneumocyte | 5 studies | 24% ± 5% | |
smooth muscle cell | 5 studies | 22% ± 5% | |
neuron | 4 studies | 31% ± 20% | |
granule cell | 4 studies | 26% ± 7% | |
type II pneumocyte | 4 studies | 20% ± 4% | |
interneuron | 4 studies | 53% ± 22% | |
GABAergic interneuron | 3 studies | 27% ± 3% | |
microglial cell | 3 studies | 22% ± 3% | |
vein endothelial cell | 3 studies | 34% ± 23% | |
Mueller cell | 3 studies | 22% ± 4% | |
glycinergic amacrine cell | 3 studies | 18% ± 3% | |
retina horizontal cell | 3 studies | 18% ± 3% | |
endothelial cell of vascular tree | 3 studies | 38% ± 15% | |
hepatocyte | 3 studies | 58% ± 11% | |
ependymal cell | 3 studies | 50% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 6581.40 | 2641 / 2642 | 100% | 48.09 | 704 / 705 |
esophagus | 100% | 8047.09 | 1442 / 1445 | 100% | 10.86 | 183 / 183 |
adrenal gland | 100% | 5101.15 | 258 / 258 | 99% | 13.98 | 228 / 230 |
kidney | 100% | 5519.81 | 89 / 89 | 99% | 19.22 | 892 / 901 |
thymus | 100% | 5232.27 | 652 / 653 | 99% | 13.29 | 597 / 605 |
prostate | 98% | 3985.97 | 241 / 245 | 100% | 12.64 | 500 / 502 |
breast | 100% | 4972.38 | 459 / 459 | 98% | 10.95 | 1093 / 1118 |
skin | 100% | 4709.07 | 1802 / 1809 | 98% | 12.38 | 462 / 472 |
intestine | 100% | 5586.85 | 962 / 966 | 95% | 8.56 | 502 / 527 |
lung | 99% | 4218.67 | 574 / 578 | 95% | 8.06 | 1096 / 1155 |
stomach | 97% | 4794.94 | 348 / 359 | 97% | 10.15 | 278 / 286 |
uterus | 100% | 5360.69 | 170 / 170 | 90% | 7.08 | 415 / 459 |
liver | 97% | 2293.43 | 220 / 226 | 90% | 6.81 | 365 / 406 |
bladder | 100% | 5965.95 | 21 / 21 | 87% | 6.25 | 436 / 504 |
pancreas | 78% | 1286.87 | 255 / 328 | 97% | 8.60 | 173 / 178 |
ovary | 100% | 5652.54 | 180 / 180 | 70% | 4.49 | 299 / 430 |
blood vessel | 100% | 8238.10 | 1335 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 4962.30 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 3775.17 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 2676.81 | 819 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 5.96 | 41 / 45 |
eye | 0% | 0 | 0 / 0 | 85% | 6.37 | 68 / 80 |
spleen | 85% | 1461.01 | 204 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 76% | 3.84 | 22 / 29 |
peripheral blood | 16% | 278.66 | 146 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030154 | Biological process | cell differentiation |
GO_0045669 | Biological process | positive regulation of osteoblast differentiation |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0003677 | Molecular function | DNA binding |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZHX3 |
Protein name | Zinc fingers and homeoboxes protein 3 (Triple homeobox protein 1) (Zinc finger and homeodomain protein 3) Zinc fingers and homeoboxes 3 |
Synonyms | KIAA0395 TIX1 |
Description | FUNCTION: Acts as a transcriptional repressor. Involved in the early stages of mesenchymal stem cell (MSC) osteogenic differentiation. Is a regulator of podocyte gene expression during primary glomerula disease. Binds to promoter DNA. . |
Accessions | A0A0A0MST6 ENST00000373261.5 ENST00000544979.6 [Q9H4I2-2] ENST00000559234.5 [Q9H4I2-1] ENST00000309060.7 [Q9H4I2-1] F6UQN6 Q9H4I2 ENST00000559436.2 F6UBH9 H0YLR4 ENST00000436440.6 H0Y6F5 ENST00000436099.6 ENST00000560361.5 [Q9H4I2-1] A0A0A0MSU5 H0YNY7 ENST00000683867.1 [Q9H4I2-1] ENST00000432768.6 [Q9H4I2-1] ENST00000419740.6 ENST00000560364.5 ENST00000421422.1 ENST00000558993.1 |