Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 20% ± 5% |
Insufficient scRNA-seq data for expression of RECQL5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 2086.49 | 170 / 170 | 100% | 15.89 | 459 / 459 |
thymus | 100% | 6786.31 | 653 / 653 | 100% | 22.19 | 604 / 605 |
prostate | 100% | 2723.72 | 245 / 245 | 100% | 11.62 | 501 / 502 |
esophagus | 100% | 2567.55 | 1442 / 1445 | 100% | 12.19 | 183 / 183 |
skin | 100% | 2682.21 | 1809 / 1809 | 100% | 14.66 | 471 / 472 |
kidney | 100% | 3820.19 | 89 / 89 | 99% | 12.33 | 894 / 901 |
bladder | 100% | 2182.33 | 21 / 21 | 99% | 16.00 | 500 / 504 |
breast | 100% | 1914.24 | 458 / 459 | 99% | 13.45 | 1110 / 1118 |
intestine | 100% | 1949.85 | 966 / 966 | 99% | 9.58 | 521 / 527 |
ovary | 100% | 2420.68 | 180 / 180 | 99% | 10.97 | 425 / 430 |
brain | 99% | 1534.86 | 2611 / 2642 | 100% | 14.11 | 705 / 705 |
adrenal gland | 100% | 2139.30 | 257 / 258 | 99% | 9.44 | 228 / 230 |
liver | 100% | 1713.34 | 226 / 226 | 98% | 10.13 | 399 / 406 |
pancreas | 99% | 1189.35 | 326 / 328 | 99% | 12.72 | 176 / 178 |
lung | 99% | 1587.75 | 571 / 578 | 99% | 12.70 | 1144 / 1155 |
stomach | 100% | 2415.34 | 359 / 359 | 98% | 9.24 | 279 / 286 |
eye | 0% | 0 | 0 / 0 | 100% | 17.63 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.09 | 29 / 29 |
spleen | 100% | 3102.65 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 12.76 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.81 | 1 / 1 |
adipose | 100% | 1397.64 | 1201 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1144.76 | 1318 / 1335 | 0% | 0 | 0 / 0 |
heart | 92% | 826.32 | 789 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 89% | 1293.13 | 825 / 929 | 0% | 0 | 0 / 0 |
muscle | 83% | 614.12 | 663 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006281 | Biological process | DNA repair |
GO_0071466 | Biological process | cellular response to xenobiotic stimulus |
GO_1990414 | Biological process | replication-born double-strand break repair via sister chromatid exchange |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0006268 | Biological process | DNA unwinding involved in DNA replication |
GO_0051301 | Biological process | cell division |
GO_0034244 | Biological process | negative regulation of transcription elongation by RNA polymerase II |
GO_0072757 | Biological process | cellular response to camptothecin |
GO_0006260 | Biological process | DNA replication |
GO_0000724 | Biological process | double-strand break repair via homologous recombination |
GO_0006259 | Biological process | DNA metabolic process |
GO_0051304 | Biological process | chromosome separation |
GO_1990506 | Biological process | mitotic DNA-templated DNA replication |
GO_2000042 | Biological process | negative regulation of double-strand break repair via homologous recombination |
GO_0005657 | Cellular component | replication fork |
GO_0005654 | Cellular component | nucleoplasm |
GO_0097550 | Cellular component | transcription preinitiation complex |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005694 | Cellular component | chromosome |
GO_0005634 | Cellular component | nucleus |
GO_0003677 | Molecular function | DNA binding |
GO_0004386 | Molecular function | helicase activity |
GO_0009378 | Molecular function | four-way junction helicase activity |
GO_0000993 | Molecular function | RNA polymerase II complex binding |
GO_0003678 | Molecular function | DNA helicase activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
GO_0016853 | Molecular function | isomerase activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0043138 | Molecular function | 3'-5' DNA helicase activity |
Gene name | RECQL5 |
Protein name | RecQ like helicase 5 ATP-dependent DNA helicase Q5 (EC 5.6.2.4) (DNA 3'-5' helicase RecQ5) (DNA helicase, RecQ-like type 5) (RecQ5) (RecQ protein-like 5) RECQL5 protein ATP-dependent DNA helicase (EC 3.6.4.12) RECQL5 protein (RecQ protein-like 5, isoform CRA_b) |
Synonyms | RECQ5 hCG_1989322 |
Description | FUNCTION: DNA helicase that plays an important role in DNA replication, transcription and repair . Probably unwinds DNA in a 3'-5' direction (Probable). Binds to the RNA polymerase II subunit POLR2A during transcription elongation and suppresses transcription-associated genomic instability . Associates also with POLR1A and enforces the stability of ribosomal DNA arrays . Plays an important role in mitotic chromosome separation after cross-over events and cell cycle progress . Mechanistically, removes RAD51 filaments protecting stalled replication forks at common fragile sites and stimulates MUS81-EME1 endonuclease leading to mitotic DNA synthesis . Required for efficient DNA repair, including repair of inter-strand cross-links . Stimulates DNA decatenation mediated by TOP2A. Prevents sister chromatid exchange and homologous recombination. A core helicase fragment (residues 11-609) binds preferentially to splayed duplex, looped and ssDNA . . |
Accessions | J3KRM6 ENST00000578201.5 J3KSV9 ENST00000423245.6 [O94762-4] ENST00000340830.9 [O94762-3] ENST00000582464.5 A5YM55 ENST00000580078.1 J3KSL7 ENST00000584999.1 [O94762-3] O94762 ENST00000420326.6 [O94762-2] J3QLU0 ENST00000582548.1 ENST00000580707.1 J3KTQ2 Q6FIC9 ENST00000317905.10 [O94762-1] ENST00000581825.1 Q9BW80 J3KS37 |