MBD5 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	25 studies	53% ± 18%	Explore
astrocyte	19 studies	61% ± 20%	Explore
oligodendrocyte	16 studies	54% ± 17%	Explore
microglial cell	15 studies	56% ± 17%	Explore
oligodendrocyte precursor cell	14 studies	71% ± 16%	Explore
fibroblast	14 studies	47% ± 18%	Explore
glutamatergic neuron	12 studies	77% ± 18%	Explore
macrophage	12 studies	41% ± 18%	Explore
GABAergic neuron	11 studies	73% ± 21%	Explore
pericyte	11 studies	48% ± 17%	Explore
smooth muscle cell	11 studies	47% ± 18%	Explore
B cell	9 studies	30% ± 12%	Explore
adipocyte	9 studies	51% ± 14%	Explore
mast cell	9 studies	31% ± 12%	Explore
endothelial cell of lymphatic vessel	9 studies	41% ± 17%	Explore
epithelial cell	7 studies	49% ± 20%	Explore
mesothelial cell	7 studies	44% ± 17%	Explore
neuron	6 studies	65% ± 23%	Explore
interneuron	6 studies	83% ± 12%	Explore
myeloid cell	6 studies	34% ± 10%	Explore
retinal cone cell	6 studies	60% ± 31%	Explore
dendritic cell	6 studies	34% ± 9%	Explore
T cell	6 studies	37% ± 13%	Explore
natural killer cell	6 studies	33% ± 12%	Explore
basal cell	6 studies	44% ± 24%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	24% ± 9%	Explore
CD4-positive, alpha-beta T cell	5 studies	25% ± 7%	Explore
CD8-positive, alpha-beta T cell	5 studies	26% ± 8%	Explore
cardiac muscle cell	5 studies	58% ± 14%	Explore
monocyte	5 studies	41% ± 6%	Explore
ciliated cell	5 studies	40% ± 17%	Explore
type I pneumocyte	5 studies	50% ± 7%	Explore
type II pneumocyte	5 studies	56% ± 9%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	22% ± 10%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	28% ± 7%	Explore
granule cell	4 studies	73% ± 9%	Explore
endothelial cell of artery	4 studies	34% ± 16%	Explore
vein endothelial cell	4 studies	34% ± 15%	Explore
Mueller cell	4 studies	65% ± 21%	Explore
OFF-bipolar cell	4 studies	53% ± 35%	Explore
ON-bipolar cell	4 studies	53% ± 35%	Explore
amacrine cell	4 studies	73% ± 15%	Explore
retina horizontal cell	4 studies	59% ± 23%	Explore
retinal ganglion cell	4 studies	73% ± 22%	Explore
retinal rod cell	4 studies	66% ± 13%	Explore
myofibroblast cell	4 studies	41% ± 23%	Explore
club cell	4 studies	51% ± 12%	Explore
leukocyte	4 studies	53% ± 4%	Explore
cholangiocyte	3 studies	47% ± 18%	Explore
hepatic stellate cell	3 studies	45% ± 21%	Explore
mature NK T cell	3 studies	28% ± 15%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	3 studies	26% ± 6%	Explore
differentiation-committed oligodendrocyte precursor	3 studies	63% ± 10%	Explore
GABAergic interneuron	3 studies	80% ± 3%	Explore
glial cell	3 studies	46% ± 14%	Explore
progenitor cell	3 studies	62% ± 19%	Explore
plasma cell	3 studies	33% ± 4%	Explore
retinal bipolar neuron	3 studies	61% ± 32%	Explore
GABAergic amacrine cell	3 studies	78% ± 16%	Explore
glycinergic amacrine cell	3 studies	65% ± 19%	Explore
rod bipolar cell	3 studies	57% ± 31%	Explore
endothelial cell of vascular tree	3 studies	48% ± 13%	Explore
hepatocyte	3 studies	56% ± 18%	Explore
retinal pigment epithelial cell	3 studies	54% ± 25%	Explore
ependymal cell	3 studies	63% ± 19%	Explore
alveolar macrophage	3 studies	39% ± 7%	Explore
capillary endothelial cell	3 studies	40% ± 7%	Explore
respiratory goblet cell	3 studies	52% ± 19%	Explore
lymphocyte	3 studies	43% ± 12%	Explore
goblet cell	3 studies	34% ± 20%	Explore
mucus secreting cell	3 studies	44% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	17 studies	66% ± 19%	Explore
lung	6 studies	37% ± 14%	Explore
heart	5 studies	42% ± 15%	Explore
eye	5 studies	70% ± 14%	Explore
peripheral blood	3 studies	19% ± 2%	Explore
liver	3 studies	39% ± 22%	Explore
adipose	3 studies	52% ± 17%	Explore
kidney	3 studies	56% ± 10%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	1193.92	2641 / 2642	100%	4.34	702 / 705
esophagus	100%	1262.11	1445 / 1445	98%	2.92	180 / 183
ovary	100%	1516.67	180 / 180	97%	2.81	415 / 430
breast	100%	1207.19	459 / 459	96%	3.20	1078 / 1118
thymus	100%	1193.30	653 / 653	96%	2.58	580 / 605
prostate	100%	1197.35	245 / 245	95%	2.52	475 / 502
lung	100%	1063.30	577 / 578	94%	2.33	1085 / 1155
adrenal gland	100%	1201.61	258 / 258	93%	3.27	214 / 230
kidney	100%	1037.56	89 / 89	92%	3.22	832 / 901
stomach	100%	916.28	359 / 359	92%	2.17	263 / 286
pancreas	94%	376.72	308 / 328	94%	2.33	167 / 178
intestine	100%	1661.15	966 / 966	86%	1.73	454 / 527
skin	100%	1002.71	1806 / 1809	86%	2.36	407 / 472
bladder	100%	1590.43	21 / 21	81%	1.73	410 / 504
uterus	100%	1290.63	170 / 170	80%	1.78	366 / 459
liver	85%	284.22	191 / 226	37%	0.74	152 / 406
adipose	100%	1143.82	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1304.00	1335 / 1335	0%	0	0 / 0
spleen	100%	988.39	241 / 241	0%	0	0 / 0
muscle	100%	739.93	802 / 803	0%	0	0 / 0
heart	97%	724.28	833 / 861	0%	0	0 / 0
peripheral blood	92%	732.60	856 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	76%	1.46	34 / 45
eye	0%	0	0 / 0	71%	1.35	57 / 80
lymph node	0%	0	0 / 0	55%	0.97	16 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1